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Microfluidic Isolation of Aptamers with Affinity towards Multiple Myeloma Monoclonal Immunoglobulins (M-Ig)

View ORCID ProfileTimothy R. Olsen, Claudia Tapia-Alveal, Milan N. Stojanovic, Tilla S. Worgall, Qiao Lin
doi: https://doi.org/10.1101/2020.09.22.308650
Timothy R. Olsen
Columbia University
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Claudia Tapia-Alveal
Columbia University
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Milan N. Stojanovic
Columbia University
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Tilla S. Worgall
Columbia University
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Qiao Lin
Columbia University
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  • For correspondence: qlin@columbia.edu
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Abstract

Multiple myeloma (MM) is a bone marrow cancer of resident plasma cells that affects 125,000 patients in the U.S. with ∼ 30,000 new cases per year. Its signature is the clonal over-proliferation of a single plasma cell that secretes a patient specific monoclonal immunoglobulin (M-Ig). Detecting this patient specific M-Ig could allow sensitive detection of minimal residual disease in multiple myeloma from patient serum. Aptamers, single-stranded oligonucleotides with affinity and specificity to a target molecule, have recently been introduced as affinity reagents able to detect MM M-Igs. Here we adapt these benchtop M-Ig systematic evolution of ligands through exponential enrichment (SELEX) techniques to our bead integrated microfluidic SELEX (BIMS) device to rapidly generate patient specific aptamers. Using MM patient serum, we isolate patient M-Ig specific aptamers rapidly (runtime < 12 hours) with high affinity (KD < 20 nM) while consuming limited quantities of patient M-Ig (< 100 μg).

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted September 22, 2020.
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Microfluidic Isolation of Aptamers with Affinity towards Multiple Myeloma Monoclonal Immunoglobulins (M-Ig)
Timothy R. Olsen, Claudia Tapia-Alveal, Milan N. Stojanovic, Tilla S. Worgall, Qiao Lin
bioRxiv 2020.09.22.308650; doi: https://doi.org/10.1101/2020.09.22.308650
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Microfluidic Isolation of Aptamers with Affinity towards Multiple Myeloma Monoclonal Immunoglobulins (M-Ig)
Timothy R. Olsen, Claudia Tapia-Alveal, Milan N. Stojanovic, Tilla S. Worgall, Qiao Lin
bioRxiv 2020.09.22.308650; doi: https://doi.org/10.1101/2020.09.22.308650

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