New Results
Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic
Yatish Turakhia, Bryan Thornlow, Angie S. Hinrichs, Nicola De Maio, Landen Gozashti, Robert Lanfear, David Haussler, View ORCID ProfileRussell Corbett-Detig
doi: https://doi.org/10.1101/2020.09.26.314971
Yatish Turakhia
1Department of Biomolecular Engineering, University of California Santa Cruz. Santa Cruz, CA 95064, USA
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA
Bryan Thornlow
1Department of Biomolecular Engineering, University of California Santa Cruz. Santa Cruz, CA 95064, USA
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA
Angie S. Hinrichs
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA
Nicola De Maio
3European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Cambridge CB10 1SD, UK
Landen Gozashti
1Department of Biomolecular Engineering, University of California Santa Cruz. Santa Cruz, CA 95064, USA
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA
4Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA, 02138, USA
6Howard Hughes Medical Institute, University of California, Santa Cruz, CA 95064, USA
Robert Lanfear
5Department of Ecology and Evolution, Research School of Biology, Australian National University, Canberra, ACT 2601, Australia
David Haussler
1Department of Biomolecular Engineering, University of California Santa Cruz. Santa Cruz, CA 95064, USA
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA
6Howard Hughes Medical Institute, University of California, Santa Cruz, CA 95064, USA
Russell Corbett-Detig
1Department of Biomolecular Engineering, University of California Santa Cruz. Santa Cruz, CA 95064, USA
2Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA

Article usage
Posted September 28, 2020.
Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic
Yatish Turakhia, Bryan Thornlow, Angie S. Hinrichs, Nicola De Maio, Landen Gozashti, Robert Lanfear, David Haussler, Russell Corbett-Detig
bioRxiv 2020.09.26.314971; doi: https://doi.org/10.1101/2020.09.26.314971
Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic
Yatish Turakhia, Bryan Thornlow, Angie S. Hinrichs, Nicola De Maio, Landen Gozashti, Robert Lanfear, David Haussler, Russell Corbett-Detig
bioRxiv 2020.09.26.314971; doi: https://doi.org/10.1101/2020.09.26.314971
Subject Area
Subject Areas
- Biochemistry (8746)
- Bioengineering (6466)
- Bioinformatics (23304)
- Biophysics (11709)
- Cancer Biology (9130)
- Cell Biology (13220)
- Clinical Trials (138)
- Developmental Biology (7399)
- Ecology (11355)
- Epidemiology (2066)
- Evolutionary Biology (15072)
- Genetics (10389)
- Genomics (13996)
- Immunology (9106)
- Microbiology (22006)
- Molecular Biology (8765)
- Neuroscience (47294)
- Paleontology (349)
- Pathology (1418)
- Pharmacology and Toxicology (2480)
- Physiology (3701)
- Plant Biology (8040)
- Synthetic Biology (2206)
- Systems Biology (6006)
- Zoology (1246)