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TransMPRA: A framework for assaying the role of many trans-acting factors at many enhancers

View ORCID ProfileDiego Calderon, Andria Ellis, Riza M. Daza, Beth Martin, Jacob M. Tome, Wei Chen, Florence M. Chardon, Anh Leith, Choli Lee, Cole Trapnell, Jay Shendure
doi: https://doi.org/10.1101/2020.09.30.321323
Diego Calderon
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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  • ORCID record for Diego Calderon
Andria Ellis
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Riza M. Daza
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Beth Martin
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Jacob M. Tome
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Wei Chen
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
2Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA 98195, USA
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Florence M. Chardon
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Anh Leith
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Choli Lee
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
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Cole Trapnell
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
3Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA 98195, USA
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Jay Shendure
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
3Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA 98195, USA
4Howard Hughes Medical Institute, Seattle, WA 98195, USA
5Allen Discovery Center for Cell Lineage Tracing, Seattle, WA 98195, USA
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  • For correspondence: shendure@uw.edu
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Article Information

doi 
https://doi.org/10.1101/2020.09.30.321323
History 
  • October 1, 2020.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.

Author Information

  1. Diego Calderon1,
  2. Andria Ellis1,
  3. Riza M. Daza1,
  4. Beth Martin1,
  5. Jacob M. Tome1,
  6. Wei Chen1,2,
  7. Florence M. Chardon1,
  8. Anh Leith1,
  9. Choli Lee1,
  10. Cole Trapnell1,3 and
  11. Jay Shendure1,3,4,5,*
  1. 1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA
  2. 2Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA 98195, USA
  3. 3Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA 98195, USA
  4. 4Howard Hughes Medical Institute, Seattle, WA 98195, USA
  5. 5Allen Discovery Center for Cell Lineage Tracing, Seattle, WA 98195, USA
  1. ↵*Corresponding author; email: shendure{at}uw.edu
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Posted October 01, 2020.
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TransMPRA: A framework for assaying the role of many trans-acting factors at many enhancers
Diego Calderon, Andria Ellis, Riza M. Daza, Beth Martin, Jacob M. Tome, Wei Chen, Florence M. Chardon, Anh Leith, Choli Lee, Cole Trapnell, Jay Shendure
bioRxiv 2020.09.30.321323; doi: https://doi.org/10.1101/2020.09.30.321323
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TransMPRA: A framework for assaying the role of many trans-acting factors at many enhancers
Diego Calderon, Andria Ellis, Riza M. Daza, Beth Martin, Jacob M. Tome, Wei Chen, Florence M. Chardon, Anh Leith, Choli Lee, Cole Trapnell, Jay Shendure
bioRxiv 2020.09.30.321323; doi: https://doi.org/10.1101/2020.09.30.321323

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