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A Boolean Model of the Formation of Tumour Associated Macrophages in an in-vitro Model of Chronic Lymphocytic Leukaemia

Malvina Marku, Flavien Raynal, Nina Verstraete, Marcin Domagala, Miguel Madrid-Mencía, Mary Poupot, Jean-Jacques Fournié, Loïc Ysebaert, View ORCID ProfileVera Pancaldi
doi: https://doi.org/10.1101/2020.10.14.337642
Malvina Marku
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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  • For correspondence: malvina.marku@inserm.fr vera.pancaldi@inserm.fr
Flavien Raynal
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Nina Verstraete
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Marcin Domagala
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Miguel Madrid-Mencía
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Mary Poupot
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Jean-Jacques Fournié
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
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Loïc Ysebaert
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
3Service d’Hématologie, Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France
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Vera Pancaldi
1INSERM, Centre de Recherches en Cancérologie de Toulouse: 2 Avenue Hubert Curien 31037, France
2Université III Toulouse Paul Sabatier: Route de Narbonne, 31330 Toulouse
4Barcelona Supercomputing Center: Carrer de Jordi Girona, 29, 31, 08034 Barcelona, Spain
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  • ORCID record for Vera Pancaldi
  • For correspondence: malvina.marku@inserm.fr vera.pancaldi@inserm.fr
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Abstract

The tumour microenvironment is the collection of cells in and surrounding cancer cells in a tumour including a variety of immune cells, especially neutrophils and monocyte-derived macrophages. In a tumour setting, macrophages encompass a spectrum between a tumour-suppressive (M1) or tumour-promoting (M2) state. The biology of macrophages found in tumours (Tumour Associated Macrophages) remains unclear, but understanding their impact on tumour progression is highly important. In this paper, we perform a comprehensive analysis of a macrophage polarization network, following two lines of enquiry: (i) we reconstruct the macrophage polarization network based on literature, extending it to include important stimuli in a tumour setting, and (ii) we build a dynamical model able to reproduce macrophage polarization in the presence of different stimuli, including the contact with cancer cells. Our simulations recapitulate the documented macrophage phenotypes and their dependencies on specific receptors and transcription factors, while also elucidating the formation of a special type of tumour associated macrophages in an in-vitro model of chronic lymphocytic leukaemia. This model constitutes the first step towards elucidating the cross-talk between immune and cancer cells inside tumours, with the ultimate goal of identifying new therapeutic targets that could control the formation of tumour associated macrophages in patients.

Competing Interest Statement

The authors have declared no competing interest.

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Posted October 20, 2020.
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A Boolean Model of the Formation of Tumour Associated Macrophages in an in-vitro Model of Chronic Lymphocytic Leukaemia
Malvina Marku, Flavien Raynal, Nina Verstraete, Marcin Domagala, Miguel Madrid-Mencía, Mary Poupot, Jean-Jacques Fournié, Loïc Ysebaert, Vera Pancaldi
bioRxiv 2020.10.14.337642; doi: https://doi.org/10.1101/2020.10.14.337642
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A Boolean Model of the Formation of Tumour Associated Macrophages in an in-vitro Model of Chronic Lymphocytic Leukaemia
Malvina Marku, Flavien Raynal, Nina Verstraete, Marcin Domagala, Miguel Madrid-Mencía, Mary Poupot, Jean-Jacques Fournié, Loïc Ysebaert, Vera Pancaldi
bioRxiv 2020.10.14.337642; doi: https://doi.org/10.1101/2020.10.14.337642

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