Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Near-optimal rotation of colour space by zebrafish cones in vivo

View ORCID ProfileTakeshi Yoshimatsu, View ORCID ProfilePhilipp Bartel, View ORCID ProfileCornelius Schröder, View ORCID ProfileFilip K Janiak, View ORCID ProfileFrancois St-Pierre, View ORCID ProfilePhilipp Berens, View ORCID ProfileTom Baden
doi: https://doi.org/10.1101/2020.10.26.356089
Takeshi Yoshimatsu
1School of Life Sciences, University of Sussex, UK
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Takeshi Yoshimatsu
Philipp Bartel
1School of Life Sciences, University of Sussex, UK
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Philipp Bartel
Cornelius Schröder
2Institute of Ophthalmic Research, University of Tübingen, Germany
3Centre for Integrative Neuroscience, University of Tübingen, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Cornelius Schröder
Filip K Janiak
1School of Life Sciences, University of Sussex, UK
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Filip K Janiak
Francois St-Pierre
4Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
5Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA
6Systems, Synthetic, and Physical Biology Program, Rice University, Houston, TX, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Francois St-Pierre
Philipp Berens
2Institute of Ophthalmic Research, University of Tübingen, Germany
3Centre for Integrative Neuroscience, University of Tübingen, Germany
7Institute for Bioinformatics and Medical Informatics, University of Tübingen, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Philipp Berens
Tom Baden
1School of Life Sciences, University of Sussex, UK
2Institute of Ophthalmic Research, University of Tübingen, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Tom Baden
  • For correspondence: t.baden@sussex.ac.uk
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Preview PDF
Loading

Summary

For colour vision, retinal circuits must separate information about intensity and wavelength. This requires circuit-level comparison of at least two spectrally distinct photoreceptors. However, many vertebrates use four or more, and in those cases the nature and implementation of this computation remains poorly understood. Here, we establish the complete circuit architecture and function of outer retinal circuits underlying colour processing in the tetrachromatic larval zebrafish. Our findings reveal that the specific spectral tunings of the four cone types near optimally rotate the encoding of natural daylight in a principal component analysis (PCA)-like manner to yield one primary achromatic axis, two colour-opponent axes as well as a secondary UV-achromatic axis for prey capture. We note that fruit flies – the only other tetrachromat species where comparable circuit-level information is available - use essentially the same strategy to extract spectral information from their relatively blue-shifted terrestrial visual world. Together, our results suggest that rotating colour space into achromatic and chromatic axes at the eye’s first synapse may be a fundamental principle of colour vision when using more than two spectrally well-separated photoreceptor types.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The authors declare no competing interests.

  • Funding. Funding was provided by the European Research Council (ERC-StG “NeuroVisEco” 677687 to TB), The UKRI (BBSRC, BB/R014817/1 to TB), the German Ministry for Education and Research (01GQ1601, 01IS18052C, 01IS18039A to PB), the German Research Foundation (BE5601/4-1, EXC 2064 – 390727645 to PB), the Leverhulme Trust (PLP-2017-005 to TB), the Lister Institute for Preventive Medicine (to TB). Marie Curie Sklodowska Actions individual fellowship (“ColourFish” 748716 to TY) from the European Union’s Horizon 2020 research and innovation programme. FSP was supported by the McNair Medical Foundation, start-up funds from Baylor College of Medicine, the Klingenstein-Simons Fellowship Award in Neuroscience, a Welch Foundation grant (Q-2016-20190330), NIH grants (R01EB027145 and U01NS113294), and NSF grants (NeuroNex 1707359 and IdeasLab 1935265). Sharm Knecht is supported in part by NIH grant (EY01730).

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
Back to top
PreviousNext
Posted October 26, 2020.
Download PDF
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Near-optimal rotation of colour space by zebrafish cones in vivo
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Near-optimal rotation of colour space by zebrafish cones in vivo
Takeshi Yoshimatsu, Philipp Bartel, Cornelius Schröder, Filip K Janiak, Francois St-Pierre, Philipp Berens, Tom Baden
bioRxiv 2020.10.26.356089; doi: https://doi.org/10.1101/2020.10.26.356089
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Near-optimal rotation of colour space by zebrafish cones in vivo
Takeshi Yoshimatsu, Philipp Bartel, Cornelius Schröder, Filip K Janiak, Francois St-Pierre, Philipp Berens, Tom Baden
bioRxiv 2020.10.26.356089; doi: https://doi.org/10.1101/2020.10.26.356089

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Neuroscience
Subject Areas
All Articles
  • Animal Behavior and Cognition (4237)
  • Biochemistry (9147)
  • Bioengineering (6786)
  • Bioinformatics (24025)
  • Biophysics (12137)
  • Cancer Biology (9545)
  • Cell Biology (13795)
  • Clinical Trials (138)
  • Developmental Biology (7642)
  • Ecology (11716)
  • Epidemiology (2066)
  • Evolutionary Biology (15518)
  • Genetics (10650)
  • Genomics (14332)
  • Immunology (9493)
  • Microbiology (22858)
  • Molecular Biology (9103)
  • Neuroscience (49032)
  • Paleontology (355)
  • Pathology (1484)
  • Pharmacology and Toxicology (2572)
  • Physiology (3849)
  • Plant Biology (8338)
  • Scientific Communication and Education (1472)
  • Synthetic Biology (2296)
  • Systems Biology (6196)
  • Zoology (1302)