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Long-term stability of neuronal ensembles in mouse visual cortex

View ORCID ProfileJesús Pérez-Ortega, View ORCID ProfileTzitzitlini Alejandre-García, View ORCID ProfileRafael Yuste
doi: https://doi.org/10.1101/2020.10.28.359117
Jesús Pérez-Ortega
Neurotechnology Center, Dept. Biological Sciences, Columbia University, New York, NY, 10027, USA
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  • For correspondence: jesus.perez@columbia.edu
Tzitzitlini Alejandre-García
Neurotechnology Center, Dept. Biological Sciences, Columbia University, New York, NY, 10027, USA
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Rafael Yuste
Neurotechnology Center, Dept. Biological Sciences, Columbia University, New York, NY, 10027, USA
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Abstract

Coactive neuronal ensembles are found in spontaneous and evoked cortical activity and are thought to participate in the internal representation of memories, perceptions, and mental states. In mouse visual cortex, ensembles can be optogenetically imprinted and are causally related to visual percepts, but it is still unknown how stable they are over time. Using two-photon volumetric microscopy, we performed calcium imaging over several weeks of the same neuronal populations in layer 2/3 of visual cortex of awake mice, tracking over time the activity of the same neurons in response to visual stimuli and under spontaneous activity. Only a small number of neurons remained active across days. Analyzing them, we found both stable ensembles, lasting up to 46 days, and transient ones, observed during only one imaging session. The majority of ensembles in visually-evoked activity were stable, whereas in spontaneous activity similar numbers of stable and transient ensembles were found. Among stable ensembles, more than 60 % of neurons still belonged to the same ensemble even after several weeks. These core ensemble cells had stronger functional connectivity than neurons that stopped belonging to the ensemble. Our results demonstrate that spontaneous and evoked neuronal ensembles can last weeks, providing a neuronal mechanism for the long-lasting representation of perceptual states or memories.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://www.mathworks.com/matlabcentral/fileexchange/78670-drifting-gratings-generator-for-visual-stimulation

  • https://www.mathworks.com/matlabcentral/fileexchange/78245-etl-controller-for-volumetric-imaging

  • https://github.com/PerezOrtegaJ/Catrex_GUI

  • https://github.com/PerezOrtegaJ/Neural_Ensemble_Analysis

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted October 28, 2020.
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Long-term stability of neuronal ensembles in mouse visual cortex
Jesús Pérez-Ortega, Tzitzitlini Alejandre-García, Rafael Yuste
bioRxiv 2020.10.28.359117; doi: https://doi.org/10.1101/2020.10.28.359117
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Long-term stability of neuronal ensembles in mouse visual cortex
Jesús Pérez-Ortega, Tzitzitlini Alejandre-García, Rafael Yuste
bioRxiv 2020.10.28.359117; doi: https://doi.org/10.1101/2020.10.28.359117

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