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A Tn-seq screen of Streptococcus pneumoniae uncovers DNA repair as the major pathway for desiccation tolerance and transmission

Allison J. Matthews, Hannah M. Rowe, View ORCID ProfileJason W. Rosch, View ORCID ProfileAndrew Camilli
doi: https://doi.org/10.1101/2020.11.09.375980
Allison J. Matthews
aDepartment of Molecular Biology, Tufts University School of Medicine, Boston, Massachusetts, USA
bGraduate Program in Molecular Microbiology, Graduate School of Biomedical Sciences, Tufts University School of Medicine, Boston, Massachusetts, USA
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Hannah M. Rowe
cDepartment of Infectious Diseases, St Jude Children’s Research Hospital, Memphis, TN, USA
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Jason W. Rosch
cDepartment of Infectious Diseases, St Jude Children’s Research Hospital, Memphis, TN, USA
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Andrew Camilli
aDepartment of Molecular Biology, Tufts University School of Medicine, Boston, Massachusetts, USA
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  • For correspondence: andrew.camilli@tufts.edu
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ABSTRACT

Streptococcus pneumoniae is an opportunistic pathogen that is a common cause of serious invasive diseases such as pneumonia, bacteremia, meningitis, and otitis media. Transmission of this bacterium has classically been thought to occur through inhalation of respiratory droplets and direct contact with nasal secretions. However, the demonstration that S. pneumoniae is desiccation tolerant, and therefore environmentally stable for extended periods of time, opens up the possibility that this pathogen is also transmitted via contaminated surfaces (fomites). To better understand the molecular mechanisms that enable S. pneumoniae to survive periods of desiccation, we performed a high throughput transposon sequencing (Tn-seq) screen in search of genetic determinants of desiccation tolerance. We identified 42 genes whose disruption reduced desiccation tolerance, and 45 genes that enhanced desiccation tolerance. The nucleotide excision repair pathway was the most enriched category in our Tn-seq results, and we found that additional DNA repair pathways are required for desiccation tolerance, demonstrating the importance of maintaining genome integrity after desiccation. Deletion of the nucleotide excision repair gene uvrA resulted in decreased transmission efficiency between infant mice, indicating a correlation between desiccation tolerance and pneumococcal transmission. Understanding the molecular mechanisms that enable pneumococcal persistence in the environment may enable targeting of these pathways to prevent fomite transmission, thereby preventing the establishment of new colonization and any resulting invasive disease.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 10, 2020.
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A Tn-seq screen of Streptococcus pneumoniae uncovers DNA repair as the major pathway for desiccation tolerance and transmission
Allison J. Matthews, Hannah M. Rowe, Jason W. Rosch, Andrew Camilli
bioRxiv 2020.11.09.375980; doi: https://doi.org/10.1101/2020.11.09.375980
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A Tn-seq screen of Streptococcus pneumoniae uncovers DNA repair as the major pathway for desiccation tolerance and transmission
Allison J. Matthews, Hannah M. Rowe, Jason W. Rosch, Andrew Camilli
bioRxiv 2020.11.09.375980; doi: https://doi.org/10.1101/2020.11.09.375980

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