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Streptococcus pneumoniae serotypes carried by young children and their association with Acute Otitis Media during the period 2016 – 2019

View ORCID ProfileEsra Ekinci, View ORCID ProfileStefanie Desmet, Liesbet Van Heirstraeten, Colette Mertens, Ine Wouters, Philippe Beutels, Jan Verhaegen, Surbhi Malhotra-Kumar, Heidi Theeten, NPcarriage group
doi: https://doi.org/10.1101/2020.11.16.386052
Esra Ekinci
1Centre for the Evaluation of Vaccination, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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  • ORCID record for Esra Ekinci
  • For correspondence: esra.ekinci@uantwerpen.be
Stefanie Desmet
2Reference Centre for Pneumococci, University Hospitals Leuven, Leuven, Belgium
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Liesbet Van Heirstraeten
3Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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Colette Mertens
1Centre for the Evaluation of Vaccination, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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Ine Wouters
1Centre for the Evaluation of Vaccination, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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Philippe Beutels
4Centre for Health Economics Research and Modelling Infectious Diseases, University of Antwerp, Wilrijk, Belgium
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Jan Verhaegen
2Reference Centre for Pneumococci, University Hospitals Leuven, Leuven, Belgium
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Surbhi Malhotra-Kumar
3Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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Heidi Theeten
1Centre for the Evaluation of Vaccination, Vaccine and Infectious Disease Institute, University of Antwerp, Wilrijk, Belgium
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5The members of the NPcarriage Study Group are listed at the end of the article
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Abstract

Background Streptococcus pneumoniae (Sp) is a major cause of acute otitis media (AOM). Pneumococcal conjugate vaccine (PCV) programs have altered pneumococcal serotype epidemiology in disease and carriage. To establish the clinical picture of AOM in young children exposed to the PCV program in Belgium and the Sp strains they carry, a cross-sectional study started in 2016.

Material/methods In three collection periods from February 2016 to May 2018, nasopharyngeal swabs and background characteristics were collected from children aged 6-30 months either presenting at their physician with AOM (AOM-group) or healthy and attending day care (DCC-group). Sp was detected, quantified, and characterized using both conventional culture and qPCR. Clinical signs of AOM episodes and treatment were registered by the physicians.

Results Among 3264 collected samples, overall pneumococcal carriage and density were similar in AOM (79.2% and 0.50 ×106 copies/μl) and DCC (77.5% and 0.42 ×106 copies/μl). Non-vaccine serotypes were most frequent: 23B (AOM: 12.3%; DCC: 17.4%), 11A (AOM: 7.5%; DCC: 7.4%) and 15B (AOM: 7.5%; DCC: 7.1%). Serotypes 3, 6C, 7B, 9N, 12F, 17F and 29 were more frequent in AOM than in DCC, whereas 23A and 23B frequencies were lower. Antibiotic susceptibility of Sp strains was similar in both groups . No predictors of AOM severity were identified, and 77.3% received an antibiotic prescription.

Conclusion Young children with AOM did not carry Sp more frequently or at higher load than healthy children in day care, but some ST were more frequent in AOM and are not included in the currently used vaccines.

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Posted November 18, 2020.
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Streptococcus pneumoniae serotypes carried by young children and their association with Acute Otitis Media during the period 2016 – 2019
Esra Ekinci, Stefanie Desmet, Liesbet Van Heirstraeten, Colette Mertens, Ine Wouters, Philippe Beutels, Jan Verhaegen, Surbhi Malhotra-Kumar, Heidi Theeten, NPcarriage group
bioRxiv 2020.11.16.386052; doi: https://doi.org/10.1101/2020.11.16.386052
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Streptococcus pneumoniae serotypes carried by young children and their association with Acute Otitis Media during the period 2016 – 2019
Esra Ekinci, Stefanie Desmet, Liesbet Van Heirstraeten, Colette Mertens, Ine Wouters, Philippe Beutels, Jan Verhaegen, Surbhi Malhotra-Kumar, Heidi Theeten, NPcarriage group
bioRxiv 2020.11.16.386052; doi: https://doi.org/10.1101/2020.11.16.386052

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