Deciphering spatio-temporal fluorescence changes using multi-threshold event detection (MTED)

Abstract

Recent achievements in indicator optimization and imaging techniques promote the exploration of Ca²⁺ activity patterns as a main second messenger in many organs. Astrocytes are important regulators of brain activity and well known for their Ca²⁺-dependent modulation of neurons. However, standardized methods to analyze and interpret Ca²⁺ activity recordings are missing and hindering global comparisons. Here, we present a biophysics-based concept to analyze Ca²⁺signals, which includes multiple thresholds and provides the experimenter with a comprehensive toolbox for a differentiated and in-depth characterization of Ca²⁺ signals. We analyzed various ex vivo and in vivo imaging datasets and verify the validity of our multi-threshold event detection (MTED) algorithm across Ca²⁺ indicators, imaging setups, and model systems from primary cell culture to awake, head-fixed mice. Applying our MTED concept enables standardized analysis and advances research using optical readouts of cellular activity to decrypt brain function. It allowed us to obtain new insights into the complex dependence of Ca²⁺activity patterns on temperature and neuronal activity.