Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis

Tamim Abdelaal; Jeroen Eggermont; Thomas Höllt; Ahmed Mahfouz; Marcel J.T. Reinders; Boudewijn P.F. Lelieveldt

doi:10.1101/2020.12.11.421883

New Results

Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis

View ORCID ProfileTamim Abdelaal, View ORCID ProfileJeroen Eggermont, Thomas Höllt, View ORCID ProfileAhmed Mahfouz, View ORCID ProfileMarcel J.T. Reinders, View ORCID ProfileBoudewijn P.F. Lelieveldt

doi: https://doi.org/10.1101/2020.12.11.421883

Tamim Abdelaal

1Department of Radiology, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

2Delft Bioinformatics Lab, Delft University of Technology, 2628 XE Delft, The Netherlands

3Leiden Computational Biology Center, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Tamim Abdelaal

Jeroen Eggermont

1Department of Radiology, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Jeroen Eggermont

Thomas Höllt

3Leiden Computational Biology Center, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

4Computer Graphics and Visualization, Delft University of Technology, 2628 XE Delft, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Ahmed Mahfouz

2Delft Bioinformatics Lab, Delft University of Technology, 2628 XE Delft, The Netherlands

3Leiden Computational Biology Center, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

5Department of Human Genetics, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Ahmed Mahfouz

Marcel J.T. Reinders

2Delft Bioinformatics Lab, Delft University of Technology, 2628 XE Delft, The Netherlands

3Leiden Computational Biology Center, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Marcel J.T. Reinders

Boudewijn P.F. Lelieveldt

1Department of Radiology, Leiden University Medical Center, 2333ZC Leiden, The Netherlands

2Delft Bioinformatics Lab, Delft University of Technology, 2628 XE Delft, The Netherlands

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Boudewijn P.F. Lelieveldt
For correspondence: b.p.f.lelieveldt@lumc.nl

Abstract
Full Text
Info/History
Metrics
Supplementary material
Preview PDF

Article usage

Article usage: December 2020 to April 2021

	Abstract	Full	Pdf
Dec 2020	733	11	148
Jan 2021	253	20	42
Feb 2021	85	6	16
Mar 2021	33	4	7
Apr 2021	19	3	3

View the discussion thread.

PreviousNext

Posted December 12, 2020.

Download PDF

Supplementary Material

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis

Tamim Abdelaal, Jeroen Eggermont, Thomas Höllt, Ahmed Mahfouz, Marcel J.T. Reinders, Boudewijn P.F. Lelieveldt

bioRxiv 2020.12.11.421883; doi: https://doi.org/10.1101/2020.12.11.421883

Share This Article:

Citation Tools

Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis

Tamim Abdelaal, Jeroen Eggermont, Thomas Höllt, Ahmed Mahfouz, Marcel J.T. Reinders, Boudewijn P.F. Lelieveldt

bioRxiv 2020.12.11.421883; doi: https://doi.org/10.1101/2020.12.11.421883

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (2643)
Biochemistry (5245)
Bioengineering (3659)
Bioinformatics (15764)
Biophysics (7231)
Cancer Biology (5607)
Cell Biology (8073)
Clinical Trials (138)
Developmental Biology (4755)
Ecology (7489)
Epidemiology (2059)
Evolutionary Biology (10546)
Genetics (7711)
Genomics (10102)
Immunology (5172)
Microbiology (13865)
Molecular Biology (5370)
Neuroscience (30684)
Paleontology (214)
Pathology (874)
Pharmacology and Toxicology (1522)
Physiology (2243)
Plant Biology (5001)
Scientific Communication and Education (1039)
Synthetic Biology (1383)
Systems Biology (4139)
Zoology (810)