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BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ

Jaehyeon Jeong, Keunsoo Kang, Doo Sin Jo, Anh TQ Cong, Donguk Kim, Dong-Hyung Cho, Matthew J Schellenberg, Stuart K. Calderwood, Benjamin P.C. Chen, View ORCID ProfileHeeyoun Bunch
doi: https://doi.org/10.1101/2020.12.12.422337
Jaehyeon Jeong
1Department of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 41566, Republic of Korea
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Keunsoo Kang
2Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea
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Doo Sin Jo
3Brain Science and Engineering Institute, Kyungpook National University, Daegu 41566, Republic of Korea
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Anh TQ Cong
4Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA
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Donguk Kim
1Department of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 41566, Republic of Korea
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Dong-Hyung Cho
5Department of Life Science, College of Natural Science, Kyungpook National University, Daegu 41566, Republic of Korea
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Matthew J Schellenberg
4Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN 55905, USA
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Stuart K. Calderwood
6Department of Radiation Oncology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts 02115, USA
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Benjamin P.C. Chen
7Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA
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Heeyoun Bunch
1Department of Applied Biosciences, College of Agriculture and Life Sciences, Kyungpook National University, Daegu 41566, Republic of Korea
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  • ORCID record for Heeyoun Bunch
  • For correspondence: heeyounbunch@gmail.com
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Abstract

RNA polymerase II (Pol II)-dependent transcription in stimulus-inducible genes requires topoisomerase IIβ (TOP2B)-mediated DNA strand break and the activation of DNA damage response signaling in humans. Here, we report a novel function of the breast cancer 1 (BRCA1)-BRCA1 associated ring domain 1 (BARD1) complex, in this process. We found that BRCA1 is phosphorylated at S1524 by the kinases ATM and ATR during gene activation and that this event is essential for productive transcription. Our in vitro biochemical analyses showed TOP2B and BARD1 interaction and colocalization in the EGR1 transcription start site (TSS) and that the BRCA1-BARD1 complex ubiquitinates TOP2B, which appears to stabilize TOP2B protein in the cell and binding to DNA. Intriguingly, BRCA1 phosphorylation at S1524 controls this interaction. In addition, genomic analyses indicated colocalization between TOP2B and BRCA1 in a large number of protein-coding genes. Together, these findings reveal the novel function of the BRCA1-BARD1 complex in gene expression and in the regulation of TOP2B during Pol II transcription.

Significance Statement Maintaining genomic integrity against cellular and extracellular genotoxic elements is essential for normal cell growth and function. Recent studies indicated that stimulus-induced transcription provokes topoisomerase IIβ-mediated DNA strand break and DNA damage response signaling, requiring DNA repair to be coupled with transcription. Here, we present a novel role for the BRCA1-BARD1 complex in regulating the transcription of serum-inducible genes and the stability of topoisomerase IIβ. The mechanism involving topoisomerase IIβ ubiquitination by the BRCA1-BARD1 complex and the phosphorylation of BRCA1 S1524 upon transcriptional activation appears to function as a switch to the reaction. Our findings provide the first evidence of functional interaction between the BRCA1-BARD1 complex and topoisomerase IIβ in transcription in humans.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 12, 2020.
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BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ
Jaehyeon Jeong, Keunsoo Kang, Doo Sin Jo, Anh TQ Cong, Donguk Kim, Dong-Hyung Cho, Matthew J Schellenberg, Stuart K. Calderwood, Benjamin P.C. Chen, Heeyoun Bunch
bioRxiv 2020.12.12.422337; doi: https://doi.org/10.1101/2020.12.12.422337
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BRCA1-BARD1 regulates transcription through modulating topoisomerase IIβ
Jaehyeon Jeong, Keunsoo Kang, Doo Sin Jo, Anh TQ Cong, Donguk Kim, Dong-Hyung Cho, Matthew J Schellenberg, Stuart K. Calderwood, Benjamin P.C. Chen, Heeyoun Bunch
bioRxiv 2020.12.12.422337; doi: https://doi.org/10.1101/2020.12.12.422337

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