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Quantitative cross-species translators of cardiac myocyte electrophysiology: model training, experimental validation, and applications

View ORCID ProfileStefano Morotti, Caroline Liu, View ORCID ProfileBence Hegyi, View ORCID ProfileHaibo Ni, View ORCID ProfileAlex Fogli Iseppe, View ORCID ProfileLianguo Wang, View ORCID ProfileCrystal M. Ripplinger, View ORCID ProfileDonald M. Bers, Andrew G. Edwards, View ORCID ProfileEleonora Grandi
doi: https://doi.org/10.1101/2020.12.17.423297
Stefano Morotti
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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  • For correspondence: smorotti@ucdavis.edu ele.grandi@gmail.com
Caroline Liu
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Bence Hegyi
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Haibo Ni
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Alex Fogli Iseppe
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Lianguo Wang
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Crystal M. Ripplinger
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Donald M. Bers
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Andrew G. Edwards
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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Eleonora Grandi
1Department of Pharmacology, University of California Davis, Davis, CA, USA
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  • ORCID record for Eleonora Grandi
  • For correspondence: smorotti@ucdavis.edu ele.grandi@gmail.com
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Abstract

Animal experimentation is key in the evaluation of cardiac efficacy and safety of novel therapeutic compounds. However, inter-species differences in the mechanisms regulating excitation-contraction coupling can limit the translation of experimental findings from animal models to human physiology, and undermine the assessment of drugs’ efficacy and safety. Here, we built a suite of translators for quantitatively mapping electrophysiological responses in ventricular myocytes across species. We trained these statistical operators using a broad dataset obtained by simulating populations of our biophysically detailed computational models of action potential and Ca2+ transient in mouse, rabbit, and human. We then tested our translators against experimental data describing the response to stimuli, such as ion channel block, change in beating rate, and β-adrenergic challenge. We demonstrate that this approach is well suited to predicting the effects of perturbations across different species or experimental conditions, and suggest its integration into mechanistic studies and drug development pipelines.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 18, 2020.
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Quantitative cross-species translators of cardiac myocyte electrophysiology: model training, experimental validation, and applications
Stefano Morotti, Caroline Liu, Bence Hegyi, Haibo Ni, Alex Fogli Iseppe, Lianguo Wang, Crystal M. Ripplinger, Donald M. Bers, Andrew G. Edwards, Eleonora Grandi
bioRxiv 2020.12.17.423297; doi: https://doi.org/10.1101/2020.12.17.423297
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Quantitative cross-species translators of cardiac myocyte electrophysiology: model training, experimental validation, and applications
Stefano Morotti, Caroline Liu, Bence Hegyi, Haibo Ni, Alex Fogli Iseppe, Lianguo Wang, Crystal M. Ripplinger, Donald M. Bers, Andrew G. Edwards, Eleonora Grandi
bioRxiv 2020.12.17.423297; doi: https://doi.org/10.1101/2020.12.17.423297

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