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Proteomic and functional analyses of the periodic membrane skeleton in neurons

View ORCID ProfileRuobo Zhou, View ORCID ProfileBoran Han, Roberta Nowak, Yunzhe Lu, Evan Heller, View ORCID ProfileChenglong Xia, View ORCID ProfileAthar H. Chishti, View ORCID ProfileVelia M. Fowler, View ORCID ProfileXiaowei Zhuang
doi: https://doi.org/10.1101/2020.12.23.424206
Ruobo Zhou
1Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Department of Physics, Harvard University, Cambridge, MA 02138, USA
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  • ORCID record for Ruobo Zhou
Boran Han
1Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Department of Physics, Harvard University, Cambridge, MA 02138, USA
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Roberta Nowak
2Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92307, USA
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Yunzhe Lu
4Department of Developmental, Molecular, and Chemical Biology, Tufts University School of Medicine, Boston, MA 02111, USA
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Evan Heller
1Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Department of Physics, Harvard University, Cambridge, MA 02138, USA
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Chenglong Xia
1Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Department of Physics, Harvard University, Cambridge, MA 02138, USA
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Athar H. Chishti
4Department of Developmental, Molecular, and Chemical Biology, Tufts University School of Medicine, Boston, MA 02111, USA
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Velia M. Fowler
2Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92307, USA
3Department of Biological Sciences, The University of Delaware, Newark, DE 19716, USA
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Xiaowei Zhuang
1Howard Hughes Medical Institute, Department of Chemistry and Chemical Biology, Department of Physics, Harvard University, Cambridge, MA 02138, USA
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  • For correspondence: zhuang@chemistry.harvard.edu
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Abstract

Actin, spectrin, and associated molecules form a membrane-associated periodic skeleton (MPS) in neurons. The molecular composition and functions of the MPS remain incompletely understood. Here, using co-immunoprecipitation and mass spectrometry, we identified hundreds of candidate MPS-interacting proteins that span diverse functional categories. We validated representative proteins in several of these categories, including previously unknown MPS structural components, as well as motor proteins, cell adhesion molecules, ion channels, and signaling proteins, demonstrating periodic distributions of ∼20 proteins in neurons using super-resolution imaging. Genetic perturbations of the MPS and its interacting proteins further suggested functional roles of the MPS in axon-axon and axon-dendrite interactions and in axon diameter regulation, and implicated the involvement of MPS interactions with cell adhesion molecules and non-muscle myosin in these roles. These results provide new insights into the interactome of the MPS, and suggest new functions of the MPS in neurons.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 23, 2020.
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Proteomic and functional analyses of the periodic membrane skeleton in neurons
Ruobo Zhou, Boran Han, Roberta Nowak, Yunzhe Lu, Evan Heller, Chenglong Xia, Athar H. Chishti, Velia M. Fowler, Xiaowei Zhuang
bioRxiv 2020.12.23.424206; doi: https://doi.org/10.1101/2020.12.23.424206
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Proteomic and functional analyses of the periodic membrane skeleton in neurons
Ruobo Zhou, Boran Han, Roberta Nowak, Yunzhe Lu, Evan Heller, Chenglong Xia, Athar H. Chishti, Velia M. Fowler, Xiaowei Zhuang
bioRxiv 2020.12.23.424206; doi: https://doi.org/10.1101/2020.12.23.424206

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