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Unusual mode of dimerization of retinitis pigmentosa-associated F220C rhodopsin

View ORCID ProfileGeorge Khelashvili, Anoop Narayana Pillai, View ORCID ProfileJoon Lee, Kalpana Pandey, Alexander M. Payne, View ORCID ProfileZarek Siegel, Michel A. Cuendet, View ORCID ProfileTylor R. Lewis, View ORCID ProfileVadim Y. Arshavsky, View ORCID ProfileJohannes Broichhagen, Joshua Levitz, View ORCID ProfileAnant K. Menon
doi: https://doi.org/10.1101/2020.12.28.424580
George Khelashvili
1Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY, 10065
2Institute of Computational Biomedicine, Weill Cornell Medical College, New York, NY 10065
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  • For correspondence: gek2009@med.cornell.edu akm2003@med.cornell.edu
Anoop Narayana Pillai
3Department of Biochemistry, Weill Cornell Medical College, New York, NY, 10065
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Joon Lee
3Department of Biochemistry, Weill Cornell Medical College, New York, NY, 10065
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Kalpana Pandey
3Department of Biochemistry, Weill Cornell Medical College, New York, NY, 10065
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Alexander M. Payne
4Tri-Institutional PhD Program in Chemical Biology, Weill Cornell Medical College, New York, NY, 10065
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Zarek Siegel
5Neurosciences Graduate Program, University of California San Diego, La Jolla, CA 92093
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Michel A. Cuendet
1Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY, 10065
6Ludwig Institute for Cancer Research, University of Lausanne, and Department of Oncology, University Hospital of Lausanne, 1009, Lausanne, Switzerland; Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland
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Tylor R. Lewis
7Department of Ophthalmology, Duke University Medical Center, Durham, NC, 27710
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Vadim Y. Arshavsky
7Department of Ophthalmology, Duke University Medical Center, Durham, NC, 27710
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Johannes Broichhagen
8Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Department of Chemical Biology, Robert-Rössle-Str. 10, 13125 Berlin, Germany
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Joshua Levitz
3Department of Biochemistry, Weill Cornell Medical College, New York, NY, 10065
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Anant K. Menon
3Department of Biochemistry, Weill Cornell Medical College, New York, NY, 10065
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  • For correspondence: gek2009@med.cornell.edu akm2003@med.cornell.edu
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Abstract

Mutations in the G protein-coupled receptor (GPCR) rhodopsin are a common cause of autosomal dominant retinitis pigmentosa, a blinding disease. Rhodopsin self-associates in the membrane, and the purified monomeric apo-protein opsin dimerizes in vitro as it transitions from detergent micelles to reconstitute into a lipid bilayer. We previously reported that the retinitis pigmentosa-linked F220C opsin mutant fails to dimerize in vitro, reconstituting as a monomer. Using fluorescence-based assays and molecular dynamics simulations we now report that whereas wildtype and F220C opsin display distinct dimerization propensities in vitro as previously shown, they both dimerize in the plasma membrane of HEK293 cells. Unexpectedly, molecular dynamics simulations show that F220C opsin forms an energetically favored dimer in the membrane when compared with the wild-type protein. The conformation of the F220C dimer is unique, with transmembrane helices 5 and 6 splayed apart, promoting widening of the intracellular vestibule of each protomer and influx of water into the protein interior. FRET experiments with SNAP-tagged wild-type and F220C opsin expressed in HEK293 cells are consistent with this conformational difference. We speculate that the unusual mode of dimerization of F220C opsin in the membrane may have physiological consequences.

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Posted December 29, 2020.
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Unusual mode of dimerization of retinitis pigmentosa-associated F220C rhodopsin
George Khelashvili, Anoop Narayana Pillai, Joon Lee, Kalpana Pandey, Alexander M. Payne, Zarek Siegel, Michel A. Cuendet, Tylor R. Lewis, Vadim Y. Arshavsky, Johannes Broichhagen, Joshua Levitz, Anant K. Menon
bioRxiv 2020.12.28.424580; doi: https://doi.org/10.1101/2020.12.28.424580
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Unusual mode of dimerization of retinitis pigmentosa-associated F220C rhodopsin
George Khelashvili, Anoop Narayana Pillai, Joon Lee, Kalpana Pandey, Alexander M. Payne, Zarek Siegel, Michel A. Cuendet, Tylor R. Lewis, Vadim Y. Arshavsky, Johannes Broichhagen, Joshua Levitz, Anant K. Menon
bioRxiv 2020.12.28.424580; doi: https://doi.org/10.1101/2020.12.28.424580

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