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Natural variation in GmRAV confers ecological adaptation through photoperiod control of flowering time and maturity in soybean

Yuhe Wang, Chongjing Xu, Jiafan Sun, View ORCID ProfileLidong Dong, Minmin Li, Ying Liu, Jianhui Wang, Xiaoming Zhang, Dongmei Li, Jingzhe Sun, Yuntong Zhang, Jinming Shan, Wenbin Li, Lin Zhao
doi: https://doi.org/10.1101/2021.01.11.426255
Yuhe Wang
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Chongjing Xu
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Jiafan Sun
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Lidong Dong
2Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, China
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  • ORCID record for Lidong Dong
Minmin Li
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Ying Liu
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Jianhui Wang
2Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, China
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Xiaoming Zhang
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Dongmei Li
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Jingzhe Sun
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Yuntong Zhang
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Jinming Shan
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Wenbin Li
1Key Laboratory of Soybean Biology of Ministry of Education China, Northeast Agricultural University, Harbin 150030, China
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Lin Zhao
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  • For correspondence: zhaolinneau@126.com
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ABSTRACT

Photoperiod strictly controlled vegetative and reproductive growth stages in soybean. A soybean GmRAV transcription factor containing both AP2 and B3 domains was shown to be a key component of this process. We identified six polymorphisms in GmRAV promoter that showed significant association with flowering time and maturity of soybean in one or multiple environments. Soybean varieties with minor polymorphism exhibited longer growth period contributing to soybean adaptation to lower latitudes. The cis-acting element GT1CONSENSUS motif of GmRAV promoter controlled the growth period and shortened R5-R7 by reducing the expression level of GmRAV in soybean. Three GmRAV-overexpressing (GmRAV-ox) transgenic lines displayed later flowering time and maturity, shorter height and fewer numbers of leaves compared with control plants, and transgenic inhibition of GmRAV (GmRAV-i) soybean displayed earlier flowering time and maturity, and increased plant heights. 163 GmRAV-target genes were determined to be putatively directly bound and transcriptionally regulated by GmRAV by combining the results from the DAP-seq and RNA-seq analyses. Two GmRAV binding motifs [C(A/G/T)A(C)ACAA(G/T)A(C/T)A(G/T)] and [C(T/A)A(C/T) C(T/G)CTG] were identified. GmRAV acting downstream of E3E4 delayed soybean growth period by repressing GmFT5a transcriptional activity to guaranteed both vegetative and reproductive phase long enough to allow necessary energy reserved to be accumulated.

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Posted January 12, 2021.
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Natural variation in GmRAV confers ecological adaptation through photoperiod control of flowering time and maturity in soybean
Yuhe Wang, Chongjing Xu, Jiafan Sun, Lidong Dong, Minmin Li, Ying Liu, Jianhui Wang, Xiaoming Zhang, Dongmei Li, Jingzhe Sun, Yuntong Zhang, Jinming Shan, Wenbin Li, Lin Zhao
bioRxiv 2021.01.11.426255; doi: https://doi.org/10.1101/2021.01.11.426255
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Natural variation in GmRAV confers ecological adaptation through photoperiod control of flowering time and maturity in soybean
Yuhe Wang, Chongjing Xu, Jiafan Sun, Lidong Dong, Minmin Li, Ying Liu, Jianhui Wang, Xiaoming Zhang, Dongmei Li, Jingzhe Sun, Yuntong Zhang, Jinming Shan, Wenbin Li, Lin Zhao
bioRxiv 2021.01.11.426255; doi: https://doi.org/10.1101/2021.01.11.426255

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