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Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-low Induction of Therapy Resistance

Kellie A. Cotter, John Gallon, Nadine Uebersax, Philip Rubin, Kate D. Meyer, Salvatore Piscuoglio, Samie R. Jaffrey, View ORCID ProfileMark A. Rubin
doi: https://doi.org/10.1101/2021.01.12.426354
Kellie A. Cotter
1Department for BioMedical Research, University of Bern, Bern, Switzerland
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John Gallon
2Visceral surgery and Precision Medicine research laboratory, Department of Biomedicine, University of Basel, Basel, Switzerland
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Nadine Uebersax
1Department for BioMedical Research, University of Bern, Bern, Switzerland
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Philip Rubin
1Department for BioMedical Research, University of Bern, Bern, Switzerland
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Kate D. Meyer
3Department of Biochemisty, Duke University School of Medicine, Durham, NC, USA
4Department of Neurobiology, Duke University School of Medicine, Durham, NC, USA
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Salvatore Piscuoglio
2Visceral surgery and Precision Medicine research laboratory, Department of Biomedicine, University of Basel, Basel, Switzerland
5Institute of Medical Genetics and Pathology, University Hospital Basel, Basel, Switzerland
6Clarunis, Department of Visceral Surgery, University Centre for Gastrointestinal and Liver Diseases, St. Clara Hospital and University Hospital Basel, Switzerland
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Samie R. Jaffrey
7Department of Pharmacology, Weill Cornell Medicine, New York, NY, USA
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  • For correspondence: mark.rubin@dbmr.unibe.ch srj2003@med.cornell.edu
Mark A. Rubin
1Department for BioMedical Research, University of Bern, Bern, Switzerland
8Inselspital, Bern, Switzerland
9Bern Center for Precision Medicine, Bern, Switzerland
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  • ORCID record for Mark A. Rubin
  • For correspondence: mark.rubin@dbmr.unibe.ch srj2003@med.cornell.edu
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ABSTRACT

Recent evidence has highlighted the role of N6-methyladenosine (m6A) in the regulation of mRNA expression, stability and translation, supporting a potential role for post-transcriptional regulation mediated by m6A in cancer. Here we explore prostate cancer as an exemplar and demonstrate that low levels of N6-adenosine-methyltransferase (METTL3) is associated with advanced metastatic disease. To explore this relationship, we generated the first prostate m6A maps, and further examined how METTL3 regulates expression at the level of transcription, translation, and protein. Significantly, transcripts encoding extracellular matrix proteins are consistently upregulated with METTL3 knockdown. We also examined the relationship between METTL3 and androgen signaling and discovered the upregulation of a hepatocyte nuclear factor-driven gene signature that is associated with therapy resistance in prostate cancer. Significantly, METTL3 knockdown rendered the cells resistant to androgen receptor antagonists, implicating changes in m6A as a mechanism for therapy resistance in metastatic prostate cancer.

Competing Interest Statement

S.R.J. is founder, advisor to, and owns equity in Gotham Therapeutics.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted January 12, 2021.
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Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-low Induction of Therapy Resistance
Kellie A. Cotter, John Gallon, Nadine Uebersax, Philip Rubin, Kate D. Meyer, Salvatore Piscuoglio, Samie R. Jaffrey, Mark A. Rubin
bioRxiv 2021.01.12.426354; doi: https://doi.org/10.1101/2021.01.12.426354
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Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-low Induction of Therapy Resistance
Kellie A. Cotter, John Gallon, Nadine Uebersax, Philip Rubin, Kate D. Meyer, Salvatore Piscuoglio, Samie R. Jaffrey, Mark A. Rubin
bioRxiv 2021.01.12.426354; doi: https://doi.org/10.1101/2021.01.12.426354

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