Protein family content uncovers lineage relationships and bacterial pathway maintenance mechanisms in DPANN archaea

Cindy J. Castelle; Raphaël Méheust; Alexander L. Jaffe; Kiley Seitz; Xianzhe Gong; Brett J. Baker; Jillian F. Banfield

doi:10.1101/2021.01.12.426361

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Protein family content uncovers lineage relationships and bacterial pathway maintenance mechanisms in DPANN archaea

View ORCID ProfileCindy J. Castelle, View ORCID ProfileRaphaël Méheust, View ORCID ProfileAlexander L. Jaffe, Kiley Seitz, Xianzhe Gong, Brett J. Baker, View ORCID ProfileJillian F. Banfield

doi: https://doi.org/10.1101/2021.01.12.426361

Cindy J. Castelle

1Department of Earth and Planetary Science, University of California, Berkeley, CA, USA

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For correspondence: jbanfield@berkeley.edu cjmtcastelle@gmail.com

Raphaël Méheust

1Department of Earth and Planetary Science, University of California, Berkeley, CA, USA

2Innovative Genomics Institute, University of California, Berkeley, CA, USA

8LABGeM, Génomique Métabolique, Genoscope, Institut François Jacob, CEA, Evry, France

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Alexander L. Jaffe

3Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA

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Kiley Seitz

4Department of Marine Science, University of Texas Austin, Port Aransas, TX, USA

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Xianzhe Gong

4Department of Marine Science, University of Texas Austin, Port Aransas, TX, USA

7Institute of Marine Science and Technology, Shandong University, Qingdao, Shandong, China

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Brett J. Baker

4Department of Marine Science, University of Texas Austin, Port Aransas, TX, USA

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Jillian F. Banfield

1Department of Earth and Planetary Science, University of California, Berkeley, CA, USA

2Innovative Genomics Institute, University of California, Berkeley, CA, USA

5Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA, USA

6Chan Zuckerberg Biohub, San Francisco, CA, USA

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For correspondence: jbanfield@berkeley.edu cjmtcastelle@gmail.com

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