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N-glycan chitobiose core biosynthesis by Agl24 strengthens the hypothesis of an archaeal origin of the eukaryal N-glycosylation

View ORCID ProfileBenjamin H. Meyer, Ben A. Wagstaff, Panagiotis S. Adam, Sonja-Verena Albers, View ORCID ProfileHelge C. Dorfmueller
doi: https://doi.org/10.1101/2021.01.19.427365
Benjamin H. Meyer
1Molecular Enzyme Technology and Biochemistry, Environmental Microbiology and Biotechnology, Faculty of Chemistry University Duisburg-Essen, Germany
2Division of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH UK
4Molecular Biology of Archaea, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany
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  • For correspondence: [email protected] [email protected]
Ben A. Wagstaff
2Division of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH UK
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Panagiotis S. Adam
3Group for Aquatic Microbial Ecology, Environmental Microbiology and Biotechnology, Faculty of Chemistry University Duisburg-Essen, Germany
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Sonja-Verena Albers
4Molecular Biology of Archaea, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany
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Helge C. Dorfmueller
2Division of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH UK
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  • For correspondence: [email protected] [email protected]
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Abstract

Protein N-glycosylation is the most common posttranslational modifications found in all three domains of life. The crenarchaeal N-glycosylation begins with the synthesis of a lipid-linked chitobiose core structure, identical to that in eukaryotes. Here, we report the identification of a thermostable archaeal beta-1,4-N-acetylglucosaminyltransferase, named archaeal glycosylation enzyme 24 (Agl24), responsible for the synthesis of the N-glycan chitobiose core. Biochemical characterization confirmed the function as an inverting β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol glycosyltransferase. Substitution of a conserved histidine residue, found also in the eukaryotic and bacterial homologs, demonstrated its functional importance for Agl24. Furthermore, bioinformatics and structural modeling revealed strong similarities between Agl24 and both the eukaryotic Alg14/13 and a distant relation to the bacterial MurG, which catalyze the identical or a similar process, respectively. Our data, complemented by phylogenetic analysis of Alg13 and Alg14, revealed similar sequences in Asgardarchaeota, further supporting the hypothesis that the Alg13/14 homologs in eukaryotes have been acquired during eukaryogenesis.

  • First identification and characterization of a thermostable β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol glycosyltransferase (GT family 28) in Archaea.

  • A highly conserved histidine, within a GGH motif in Agl24, Alg14, and MurG, is essential for function of Agl24.

  • Agl24-like homologs are broadly distributed among Archaea.

  • The eukaryotic Alg13 and Alg14 are closely related to the Asgard homologs, suggesting their acquisition during eukaryogenesis.

Competing Interest Statement

The authors have declared no competing interest.

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  • Abbreviation

    Agl
    archaeal glycosylation enzyme
    Alg
    Asparagine linked glycosylation
    CAZy
    Carbohydrate-Active enZymes database
    Dol
    dolichol
    Dol-P
    dolichol-phosphate
    DPANN
    archaeal superphylum containing Diapherotrites, Parvarchaeota, Aenigmarchaeota, Nanoarchaeota, Nanohaloarchaeota, Woesearchaeota and Pacearchaeota
    Glc
    glucose
    GlcA
    glucuronic acid
    GlcNAc
    N-acetylglucosamine
    GFP
    green fluorescent protein
    GT
    glycosyltransferase
    LLO
    lipid-linked oligosaccharide
    MALDI-MS
    matrix-assisted laser desorption ionization mass spectrometry
    OST
    oligosaccharyltransferase
    SDS-PAGE
    sodium dodecyl sulfate–polyacrylamide gel electrophoresis
    TACK
    archaeal superphylum containing Thaumarchaeota, Aigarchaeota, Crenarchaeota and Korarchaeota
    TMD
    transmembrane domain
    UDP
    uridine diphosphate
    Und
    undecaprenol
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    N-glycan chitobiose core biosynthesis by Agl24 strengthens the hypothesis of an archaeal origin of the eukaryal N-glycosylation
    Benjamin H. Meyer, Ben A. Wagstaff, Panagiotis S. Adam, Sonja-Verena Albers, Helge C. Dorfmueller
    bioRxiv 2021.01.19.427365; doi: https://doi.org/10.1101/2021.01.19.427365
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    N-glycan chitobiose core biosynthesis by Agl24 strengthens the hypothesis of an archaeal origin of the eukaryal N-glycosylation
    Benjamin H. Meyer, Ben A. Wagstaff, Panagiotis S. Adam, Sonja-Verena Albers, Helge C. Dorfmueller
    bioRxiv 2021.01.19.427365; doi: https://doi.org/10.1101/2021.01.19.427365

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