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Bispecific antibody neutralizes circulating SARS-CoV-2 variants, prevents escape and protects mice from disease

Raoul De Gasparo, Mattia Pedotti, Luca Simonelli, Petr Nickl, Frauke Muecksch, Irene Cassaniti, Elena Percivalle, Julio C. C. Lorenzi, Federica Mazzola, Davide Magrì, Tereza Michalcikova, Jan Haviernik, Vaclav Honig, Blanka Mrazkova, Natalie Polakova, Andrea Fortova, Jolana Tureckova, Veronika Iatsiuk, Salvatore Di Girolamo, Martin Palus, Dagmar Zudova, Petr Bednar, Ivana Bukova, Filippo Bianchini, Dora Mehn, Radim Nencka, Petra Strakova, Oto Pavlis, Jan Rozman, Sabrina Gioria, Josè Camilla Sammartino, Federica Giardina, Stefano Gaiarsa, Qiang Pan Hammarström, Christopher O. Barnes, Pamela J. Bjorkman, Luigi Calzolai, Antonio Piralla, Fausto Baldanti, Michel C. Nussenzweig, Paul D. Bieniasz, Theodora Hatziioannou, Jan Prochazka, Radislav Sedlacek, Davide F. Robbiani, Daniel Ruzek, View ORCID ProfileLuca Varani
doi: https://doi.org/10.1101/2021.01.22.427567
Raoul De Gasparo
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Mattia Pedotti
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Luca Simonelli
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Petr Nickl
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Frauke Muecksch
hLaboratory of Retrovirology, The Rockefeller University, New York, NY, USA
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Irene Cassaniti
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Elena Percivalle
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Julio C. C. Lorenzi
iLaboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA
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Federica Mazzola
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Davide Magrì
jEuropean Commission, Joint Research Centre, Ispra, VA, Italy
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Tereza Michalcikova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Jan Haviernik
cVeterinary Research Institute, Brno, Czech Republic
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Vaclav Honig
cVeterinary Research Institute, Brno, Czech Republic
dInstitute of Parasitology, Biology Centre of the Czech Academy of Sciences, Ceske Budejovice, Czech Republic
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Blanka Mrazkova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Natalie Polakova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Andrea Fortova
cVeterinary Research Institute, Brno, Czech Republic
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Jolana Tureckova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Veronika Iatsiuk
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Salvatore Di Girolamo
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Martin Palus
cVeterinary Research Institute, Brno, Czech Republic
dInstitute of Parasitology, Biology Centre of the Czech Academy of Sciences, Ceske Budejovice, Czech Republic
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Dagmar Zudova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Petr Bednar
cVeterinary Research Institute, Brno, Czech Republic
eFaculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic
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Ivana Bukova
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Filippo Bianchini
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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Dora Mehn
jEuropean Commission, Joint Research Centre, Ispra, VA, Italy
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Radim Nencka
fInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic
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Petra Strakova
cVeterinary Research Institute, Brno, Czech Republic
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Oto Pavlis
gCenter of Biological Defense, Military Health Institute, Military Medical Agency, Techonin, Czech Republic
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Jan Rozman
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Sabrina Gioria
jEuropean Commission, Joint Research Centre, Ispra, VA, Italy
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Josè Camilla Sammartino
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Federica Giardina
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Stefano Gaiarsa
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Qiang Pan Hammarström
mDepartment of Biosciences and Nutrition, Karolinska Institutet, SE14183, Huddinge, Sweden
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Christopher O. Barnes
nDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
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Pamela J. Bjorkman
nDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
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Luigi Calzolai
jEuropean Commission, Joint Research Centre, Ispra, VA, Italy
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Antonio Piralla
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Fausto Baldanti
kMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy
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Michel C. Nussenzweig
iLaboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA
lHoward Hughes Medical Institute, The Rockefeller University, New York, NY, USA
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Paul D. Bieniasz
hLaboratory of Retrovirology, The Rockefeller University, New York, NY, USA
lHoward Hughes Medical Institute, The Rockefeller University, New York, NY, USA
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Theodora Hatziioannou
hLaboratory of Retrovirology, The Rockefeller University, New York, NY, USA
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Jan Prochazka
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Radislav Sedlacek
bCzech Centre of Phenogenomics, Institute of Molecular Genetics of the Czech Academy of Sciences, Vestec, Czech Republic
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Davide F. Robbiani
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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  • For correspondence: luca.varani@irb.usi.ch
Daniel Ruzek
cVeterinary Research Institute, Brno, Czech Republic
dInstitute of Parasitology, Biology Centre of the Czech Academy of Sciences, Ceske Budejovice, Czech Republic
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  • For correspondence: luca.varani@irb.usi.ch
Luca Varani
aInstitute for Research in Biomedicine, Università della Svizzera italiana (USI), Bellinzona, Switzerland
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  • ORCID record for Luca Varani
  • For correspondence: luca.varani@irb.usi.ch
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Summary

Neutralizing antibodies targeting the receptor binding domain (RBD) of the SARS-CoV-2 Spike (S) are among the most promising approaches against coronavirus disease 2019 (COVID-19)1,2. We developed a bispecific, IgG1-like molecule (CoV-X2) based on two antibodies derived from COVID-19 convalescent donors, C121 and C1353. CoV-X2 simultaneously binds two independent sites on the RBD and, unlike its parental antibodies, prevents detectable S binding to Angiotensin-Converting Enzyme 2 (ACE2), the virus cellular receptor. Furthermore, CoV-X2 neutralizes SARS-CoV-2 and its variants of concern, as well as the escape mutants generated by the parental monoclonals. In a novel animal model of SARS-CoV-2 infection with lung inflammation, CoV-X2 protects mice from disease and suppresses viral escape. Thus, simultaneous targeting of non-overlapping RBD epitopes by IgG-like bispecific antibodies is feasible and effective, combining into a single molecule the advantages of antibody cocktails.

Competing Interest Statement

In connection with this work the Institute for Research in Biomedicine has filed a provisional patent application on which L.V. is inventor (PCT/EP2020/085342). The Rockefeller University has filed a provisional patent application on which D.F.R. and M.C.N. are inventors.

Footnotes

  • - Bispecific neutralizes SARS-CoV-2 and its recent variants of concerns (colloquially known as UK, Brazil and S.Africa) in neutralization assays with infectious virus. - Bispecific therapeutically protects animals when administered after virus infection.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted March 05, 2021.
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Bispecific antibody neutralizes circulating SARS-CoV-2 variants, prevents escape and protects mice from disease
Raoul De Gasparo, Mattia Pedotti, Luca Simonelli, Petr Nickl, Frauke Muecksch, Irene Cassaniti, Elena Percivalle, Julio C. C. Lorenzi, Federica Mazzola, Davide Magrì, Tereza Michalcikova, Jan Haviernik, Vaclav Honig, Blanka Mrazkova, Natalie Polakova, Andrea Fortova, Jolana Tureckova, Veronika Iatsiuk, Salvatore Di Girolamo, Martin Palus, Dagmar Zudova, Petr Bednar, Ivana Bukova, Filippo Bianchini, Dora Mehn, Radim Nencka, Petra Strakova, Oto Pavlis, Jan Rozman, Sabrina Gioria, Josè Camilla Sammartino, Federica Giardina, Stefano Gaiarsa, Qiang Pan Hammarström, Christopher O. Barnes, Pamela J. Bjorkman, Luigi Calzolai, Antonio Piralla, Fausto Baldanti, Michel C. Nussenzweig, Paul D. Bieniasz, Theodora Hatziioannou, Jan Prochazka, Radislav Sedlacek, Davide F. Robbiani, Daniel Ruzek, Luca Varani
bioRxiv 2021.01.22.427567; doi: https://doi.org/10.1101/2021.01.22.427567
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Bispecific antibody neutralizes circulating SARS-CoV-2 variants, prevents escape and protects mice from disease
Raoul De Gasparo, Mattia Pedotti, Luca Simonelli, Petr Nickl, Frauke Muecksch, Irene Cassaniti, Elena Percivalle, Julio C. C. Lorenzi, Federica Mazzola, Davide Magrì, Tereza Michalcikova, Jan Haviernik, Vaclav Honig, Blanka Mrazkova, Natalie Polakova, Andrea Fortova, Jolana Tureckova, Veronika Iatsiuk, Salvatore Di Girolamo, Martin Palus, Dagmar Zudova, Petr Bednar, Ivana Bukova, Filippo Bianchini, Dora Mehn, Radim Nencka, Petra Strakova, Oto Pavlis, Jan Rozman, Sabrina Gioria, Josè Camilla Sammartino, Federica Giardina, Stefano Gaiarsa, Qiang Pan Hammarström, Christopher O. Barnes, Pamela J. Bjorkman, Luigi Calzolai, Antonio Piralla, Fausto Baldanti, Michel C. Nussenzweig, Paul D. Bieniasz, Theodora Hatziioannou, Jan Prochazka, Radislav Sedlacek, Davide F. Robbiani, Daniel Ruzek, Luca Varani
bioRxiv 2021.01.22.427567; doi: https://doi.org/10.1101/2021.01.22.427567

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