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Phototrophy and carbon fixation in Chlorobi postdate the rise of oxygen

View ORCID ProfileLM Ward, PM Shih
doi: https://doi.org/10.1101/2021.01.22.427768
LM Ward
1Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA, United States
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  • For correspondence: lewis_ward@fas.harvard.edu
PM Shih
2Department of Plant Biology, University of California, Davis, Davis, CA, United States
3Department of Energy, Feedstocks Division, Joint BioEnergy Institute, Emeryville, CA, United States
4Environmental Genomics and Systems Biology Division, Lawrence Berkeley National, Laboratory, Berkeley, CA, United States
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Abstract

While most productivity on the surface of the Earth today is fueled by oxygenic photosynthesis, during the early parts of Earth history it is thought that anoxygenic photosynthesis—using compounds like ferrous iron or sulfide as electron donors—drove most global carbon fixation. Anoxygenic photosynthesis is still performed by diverse bacteria in niche environments today. Of these, the Chlorobi (formerly green sulfur bacteria) are often interpreted as being particularly ancient and are frequently proposed to have fueled the biosphere early in Earth history before the rise of oxygenic photosynthesis. Here, we perform comparative genomic, phylogenetic, and molecular clock analyses to determine the antiquity of the Chlorobi and their characteristic phenotypes. We show that contrary to common assumptions, the Chlorobi clade is relatively young, with anoxygenic phototrophy, carbon fixation via the rTCA pathway, and iron oxidation all significantly postdating the rise of oxygen ~2.3 billion years ago. The Chlorobi therefore could not have fueled the Archean biosphere, but instead represent a relatively young radiation of organisms which likely acquired the capacity for anoxygenic photosynthesis and other traits via horizontal gene transfer sometime after the evolution of oxygenic Cyanobacteria.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted January 24, 2021.
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Phototrophy and carbon fixation in Chlorobi postdate the rise of oxygen
LM Ward, PM Shih
bioRxiv 2021.01.22.427768; doi: https://doi.org/10.1101/2021.01.22.427768
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Phototrophy and carbon fixation in Chlorobi postdate the rise of oxygen
LM Ward, PM Shih
bioRxiv 2021.01.22.427768; doi: https://doi.org/10.1101/2021.01.22.427768

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