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A quick and versatile protocol for the 3D visualization of transgene expression across the whole body of larval Drosophila

View ORCID ProfileOliver Kobler, View ORCID ProfileAliće Weiglein, Kathrin Hartung, Yi-chun Chen, View ORCID ProfileBertram Gerber, View ORCID ProfileUlrich Thomas
doi: https://doi.org/10.1101/2021.01.28.428398
Oliver Kobler
1Leibniz Institute for Neurobiology, Combinatorial NeuroImaging Core Facility (CNI), Magdeburg, Germany
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  • For correspondence: Oliver.Kobler@lin-magdeburg.de Bertram.Gerber@lin-magdeburg.de Ulrich.Thomas@lin-magdeburg.de
Aliće Weiglein
2Leibniz Institute for Neurobiology, Department of Genetics of Learning and Memory, Magdeburg, Germany
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Kathrin Hartung
3Leibniz Institute for Neurobiology, Department of Neurochemistry and Molecular Biology, Magdeburg, Germany
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Yi-chun Chen
2Leibniz Institute for Neurobiology, Department of Genetics of Learning and Memory, Magdeburg, Germany
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Bertram Gerber
2Leibniz Institute for Neurobiology, Department of Genetics of Learning and Memory, Magdeburg, Germany
4Institute of Biology, Otto von Guericke University, Magdeburg, Germany
5Center for Behavioral Brain Sciences, Otto von Guericke University, Magdeburg, Germany
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  • For correspondence: Oliver.Kobler@lin-magdeburg.de Bertram.Gerber@lin-magdeburg.de Ulrich.Thomas@lin-magdeburg.de
Ulrich Thomas
3Leibniz Institute for Neurobiology, Department of Neurochemistry and Molecular Biology, Magdeburg, Germany
6Leibniz Institute for Neurobiology, Department of Cellular Neuroscience, Magdeburg, Germany
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  • ORCID record for Ulrich Thomas
  • For correspondence: Oliver.Kobler@lin-magdeburg.de Bertram.Gerber@lin-magdeburg.de Ulrich.Thomas@lin-magdeburg.de
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Abstract

Larval Drosophila are used as a genetically accessible study case in many areas of biological research. Here we report a fast, robust and user-friendly procedure for the whole-body multifluorescence imaging of Drosophila larvae; the protocol has been optimized specifically for larvae by systematically tackling the pitfalls associated with clearing this small but cuticularized organism. Tests on various fluorescent proteins reveal that the recently introduced monomeric infrared fluorescent protein (mIFP) is particularly suitable for our approach. This approach comprises an effective, low-cost clearing protocol with minimal handling time and reduced toxicity in the reagents employed. It combines a success rate high enough to allow for small-scale screening approaches and a resolution sufficient for cellular-resolution analyses with light sheet and confocal microscopy. Given that publications and database documentations typically specify expression patterns of transgenic driver lines only within a given organ system of interest, the present procedure should be versatile enough to extend such documentation systematically to the whole body. As examples, the expression patterns of transgenic driver lines covering the majority of neurons, or subsets of chemosensory, central brain or motor neurons, are documented in the context of whole larval body volumes (using nsyb-Gal4, IR76b-Gal4, APL-Gal4 and mushroom body Kenyon cells, or OK371-Gal4, respectively). Notably, the presented protocol allows for triple-color fluorescence imaging with near-infrared, red and yellow fluorescent proteins.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted January 28, 2021.
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A quick and versatile protocol for the 3D visualization of transgene expression across the whole body of larval Drosophila
Oliver Kobler, Aliće Weiglein, Kathrin Hartung, Yi-chun Chen, Bertram Gerber, Ulrich Thomas
bioRxiv 2021.01.28.428398; doi: https://doi.org/10.1101/2021.01.28.428398
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A quick and versatile protocol for the 3D visualization of transgene expression across the whole body of larval Drosophila
Oliver Kobler, Aliće Weiglein, Kathrin Hartung, Yi-chun Chen, Bertram Gerber, Ulrich Thomas
bioRxiv 2021.01.28.428398; doi: https://doi.org/10.1101/2021.01.28.428398

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