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Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes

Maria Fasolino, Gregory W. Schwartz, Maria L. Golson, Yue J. Wang, Ashleigh Morgan, Chengyang Liu, Jonathan Schug, Jinping Liu, Minghui Wu, Daniel Traum, Ayano Kondo, Catherine L. May, Naomi Goldman, Wenliang Wang, the HPAP Consortium, Michael Feldman, Jason H. Moore, Alberto S. Japp, Michael R. Betts, Robert B. Faryabi, Ali Naji, Klaus H. Kaestner, Golnaz Vahedi
doi: https://doi.org/10.1101/2021.01.28.428598
Maria Fasolino
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Gregory W. Schwartz
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
5Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
6Abramson Family Cancer Research Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
8Institute for Biomedical Informatics
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Maria L. Golson
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Yue J. Wang
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Ashleigh Morgan
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Chengyang Liu
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
9Department of Surgery, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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Jonathan Schug
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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Jinping Liu
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Minghui Wu
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Daniel Traum
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Ayano Kondo
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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Catherine L. May
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Naomi Goldman
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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Wenliang Wang
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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7The Human Pancreas Analysis Program
Michael Feldman
5Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
8Institute for Biomedical Informatics
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Jason H. Moore
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
8Institute for Biomedical Informatics
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Alberto S. Japp
7The Human Pancreas Analysis Program
10Department of Microbiology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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Michael R. Betts
7The Human Pancreas Analysis Program
10Department of Microbiology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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Robert B. Faryabi
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
5Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
6Abramson Family Cancer Research Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
8Institute for Biomedical Informatics
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  • For correspondence: vahedi@mail.med.upenn.edu
Ali Naji
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
9Department of Surgery, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
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  • For correspondence: vahedi@mail.med.upenn.edu
Klaus H. Kaestner
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
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  • For correspondence: vahedi@mail.med.upenn.edu
Golnaz Vahedi
1Department of Genetics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
2Institute for Immunology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
3Epigenetics Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
4Institute for Diabetes, Obesity and Metabolism, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
6Abramson Family Cancer Research Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA
7The Human Pancreas Analysis Program
8Institute for Biomedical Informatics
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  • For correspondence: vahedi@mail.med.upenn.edu
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Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes
Maria Fasolino, Gregory W. Schwartz, Maria L. Golson, Yue J. Wang, Ashleigh Morgan, Chengyang Liu, Jonathan Schug, Jinping Liu, Minghui Wu, Daniel Traum, Ayano Kondo, Catherine L. May, Naomi Goldman, Wenliang Wang, the HPAP Consortium, Michael Feldman, Jason H. Moore, Alberto S. Japp, Michael R. Betts, Robert B. Faryabi, Ali Naji, Klaus H. Kaestner, Golnaz Vahedi
bioRxiv 2021.01.28.428598; doi: https://doi.org/10.1101/2021.01.28.428598
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Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes
Maria Fasolino, Gregory W. Schwartz, Maria L. Golson, Yue J. Wang, Ashleigh Morgan, Chengyang Liu, Jonathan Schug, Jinping Liu, Minghui Wu, Daniel Traum, Ayano Kondo, Catherine L. May, Naomi Goldman, Wenliang Wang, the HPAP Consortium, Michael Feldman, Jason H. Moore, Alberto S. Japp, Michael R. Betts, Robert B. Faryabi, Ali Naji, Klaus H. Kaestner, Golnaz Vahedi
bioRxiv 2021.01.28.428598; doi: https://doi.org/10.1101/2021.01.28.428598

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