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Expanding the SiMPl plasmid toolbox for use with spectinomycin/streptomycin

View ORCID ProfileNavaneethan Palanisamy, View ORCID ProfileJara Ballestin Ballestin, View ORCID ProfileBarbara Di Ventura
doi: https://doi.org/10.1101/2021.02.04.429595
Navaneethan Palanisamy
ViraTherapeutics GmbH, Bundesstraße 27, 6063 Rum, Austria
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  • For correspondence: navaneethan.palanisamy@biologie.uni-freiburg.de barbara.diventura@biologie.uni-freiburg.de
Jara Ballestin Ballestin
ViraTherapeutics GmbH, Bundesstraße 27, 6063 Rum, Austria
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Barbara Di Ventura
ViraTherapeutics GmbH, Bundesstraße 27, 6063 Rum, Austria
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  • For correspondence: navaneethan.palanisamy@biologie.uni-freiburg.de barbara.diventura@biologie.uni-freiburg.de
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ABSTRACT

We recently developed the SiMPl plasmid toolbox, which is constituted by pairs of plasmids, generically indicated as pSiMPlx_N and pSiMPlx_C, which can be stably maintained in Escherichia coli with a single antibiotic x. The method exploits the split intein gp41-1 to reconstitute the enzyme conferring resistance towards the antibiotic x, whereby each enzyme fragment is expressed from one of the plasmids in the pair. pSiMPl plasmids are currently available for use with ampicillin, kanamycin, chloramphenicol, hygromycin and puromycin. Here we introduce another pair for use with spectinomycin/streptomycin broadening the application spectrum of the SiMPl toolbox. To find functional splice sites in aminoglycoside adenylyltransferase we apply a streamlined strategy looking exclusively at the flexibility of native cysteine and serine residues, which we first validated splitting the enzymes conferring resistance towards ampicillin, kanamycin, chloramphenicol and hygromycin. This strategy could be used in the future to split other enzymes conferring resistance towards antibiotics.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted February 04, 2021.
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Expanding the SiMPl plasmid toolbox for use with spectinomycin/streptomycin
Navaneethan Palanisamy, Jara Ballestin Ballestin, Barbara Di Ventura
bioRxiv 2021.02.04.429595; doi: https://doi.org/10.1101/2021.02.04.429595
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Expanding the SiMPl plasmid toolbox for use with spectinomycin/streptomycin
Navaneethan Palanisamy, Jara Ballestin Ballestin, Barbara Di Ventura
bioRxiv 2021.02.04.429595; doi: https://doi.org/10.1101/2021.02.04.429595

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