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High coverage whole genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios

Marta Byrska-Bishop, Uday S. Evani, Xuefang Zhao, Anna O. Basile, Haley J. Abel, Allison A. Regier, André Corvelo, Wayne E. Clarke, Rajeeva Musunuri, Kshithija Nagulapalli, Susan Fairley, Alexi Runnels, Lara Winterkorn, Ernesto Lowy-Gallego, The Human Genome Structural Variation Consortium, Paul Flicek, Soren Germer, Harrison Brand, View ORCID ProfileIra M. Hall, Michael E. Talkowski, View ORCID ProfileGiuseppe Narzisi, Michael C. Zody
doi: https://doi.org/10.1101/2021.02.06.430068
Marta Byrska-Bishop
1New York Genome Center, New York, NY, USA
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  • For correspondence: mczody@nygenome.org mbyrska-bishop@nygenome.org
Uday S. Evani
1New York Genome Center, New York, NY, USA
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Xuefang Zhao
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
3Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA
4Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
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Anna O. Basile
1New York Genome Center, New York, NY, USA
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Haley J. Abel
5McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA
6Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
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Allison A. Regier
5McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA
6Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
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André Corvelo
1New York Genome Center, New York, NY, USA
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Wayne E. Clarke
1New York Genome Center, New York, NY, USA
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Rajeeva Musunuri
1New York Genome Center, New York, NY, USA
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Kshithija Nagulapalli
1New York Genome Center, New York, NY, USA
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Susan Fairley
7European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
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Alexi Runnels
1New York Genome Center, New York, NY, USA
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Lara Winterkorn
1New York Genome Center, New York, NY, USA
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Ernesto Lowy-Gallego
7European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
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8List of the HGSVC authors and corresponding affiliations are at the end of the manuscript
Paul Flicek
7European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
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Soren Germer
1New York Genome Center, New York, NY, USA
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Harrison Brand
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
3Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA
4Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
9Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Ira M. Hall
5McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA
6Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
10Center for Genomic Health, Yale University School of Medicine, New Haven, CT, USA
11Department of Genetics, Yale University School of Medicine, New Haven, CT, USA
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  • ORCID record for Ira M. Hall
Michael E. Talkowski
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
3Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA
4Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
9Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Giuseppe Narzisi
1New York Genome Center, New York, NY, USA
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  • ORCID record for Giuseppe Narzisi
Michael C. Zody
1New York Genome Center, New York, NY, USA
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  • For correspondence: mczody@nygenome.org mbyrska-bishop@nygenome.org
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Article Information

doi 
https://doi.org/10.1101/2021.02.06.430068
History 
  • February 7, 2021.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.

Author Information

  1. Marta Byrska-Bishop*,1,@,
  2. Uday S. Evani*,1,
  3. Xuefang Zhao*,2,3,4,
  4. Anna O. Basile1,
  5. Haley J. Abel5,6,
  6. Allison A. Regier5,6,
  7. André Corvelo1,
  8. Wayne E. Clarke1,
  9. Rajeeva Musunuri1,
  10. Kshithija Nagulapalli1,
  11. Susan Fairley7,
  12. Alexi Runnels1,
  13. Lara Winterkorn1,
  14. Ernesto Lowy-Gallego7,
  15. The Human Genome Structural Variation Consortium8,
  16. Paul Flicek7,
  17. Soren Germer1,
  18. Harrison Brand2,3,4,9,
  19. Ira M. Hall5,6,10,11,
  20. Michael E. Talkowski2,3,4,9,
  21. Giuseppe Narzisi1 and
  22. Michael C. Zody1,@
  1. 1New York Genome Center, New York, NY, USA
  2. 2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
  3. 3Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA
  4. 4Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA
  5. 5McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA
  6. 6Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
  7. 7European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
  8. 8List of the HGSVC authors and corresponding affiliations are at the end of the manuscript
  9. 9Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
  10. 10Center for Genomic Health, Yale University School of Medicine, New Haven, CT, USA
  11. 11Department of Genetics, Yale University School of Medicine, New Haven, CT, USA
  1. ↵@ Correspondence should be addressed to: mczody{at}nygenome.org (M.C.Z.) and mbyrska-bishop{at}nygenome.org (M.B.).
  1. ↵* These authors contributed equally to this work.

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High coverage whole genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
Marta Byrska-Bishop, Uday S. Evani, Xuefang Zhao, Anna O. Basile, Haley J. Abel, Allison A. Regier, André Corvelo, Wayne E. Clarke, Rajeeva Musunuri, Kshithija Nagulapalli, Susan Fairley, Alexi Runnels, Lara Winterkorn, Ernesto Lowy-Gallego, The Human Genome Structural Variation Consortium, Paul Flicek, Soren Germer, Harrison Brand, Ira M. Hall, Michael E. Talkowski, Giuseppe Narzisi, Michael C. Zody
bioRxiv 2021.02.06.430068; doi: https://doi.org/10.1101/2021.02.06.430068
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High coverage whole genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
Marta Byrska-Bishop, Uday S. Evani, Xuefang Zhao, Anna O. Basile, Haley J. Abel, Allison A. Regier, André Corvelo, Wayne E. Clarke, Rajeeva Musunuri, Kshithija Nagulapalli, Susan Fairley, Alexi Runnels, Lara Winterkorn, Ernesto Lowy-Gallego, The Human Genome Structural Variation Consortium, Paul Flicek, Soren Germer, Harrison Brand, Ira M. Hall, Michael E. Talkowski, Giuseppe Narzisi, Michael C. Zody
bioRxiv 2021.02.06.430068; doi: https://doi.org/10.1101/2021.02.06.430068

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