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Fluctuations in TCR and pMHC interactions regulate T cell activation

View ORCID ProfileJoseph R. Egan, View ORCID ProfileEnas Abu-Shah, View ORCID ProfileOmer Dushek, View ORCID ProfileTim Elliott, View ORCID ProfileBen D. MacArthur
doi: https://doi.org/10.1101/2021.02.09.430441
Joseph R. Egan
aMathematical Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
bCentre for Cancer Immunology, University Hospital Southampton, Southampton SO16 6YD, United Kingdom
cInstitute for Life Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
dSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom
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  • For correspondence: j.r.egan@soton.ac.uk
Enas Abu-Shah
dSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom
eKennedy Institute of Rheumatology, University of Oxford, Oxford OX3 7FY, United Kingdom
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Omer Dushek
dSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom
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Tim Elliott
bCentre for Cancer Immunology, University Hospital Southampton, Southampton SO16 6YD, United Kingdom
cInstitute for Life Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
fNuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom
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Ben D. MacArthur
aMathematical Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
cInstitute for Life Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom
gCentre for Human Development, Stem Cells and Regeneration, University of Southampton, Southampton SO17 1BJ, United Kingdom
hAlan Turing Institute, London NW1 2DB, United Kingdom
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ABSTRACT

Adaptive immune responses depend on interactions between T cell receptors (TCRs) and peptide major-histocompatibility complex (pMHC) ligands located on the surface of T cells and antigen presenting cells (APCs) respectively. As TCRs and pMHCs are often only present at low copy-numbers their interactions are inherently stochastic, yet the role of stochastic fluctuations on T cell function is unclear. Here we introduce a minimal stochastic model of T cell activation that accounts for serial TCR-pMHC engagement, reversible TCR conformational change and TCR aggregation. Analysis of this model indicates that it is not the strength of binding between the T cell and the APC cell per se that elicits an immune response, but rather the information imparted to the T cell from the encounter, as assessed by the entropy rate of the TCR-pMHC binding dynamics. This view provides an information-theoretic interpretation of T cell activation that explains a range of experimental observations. Based on this analysis we propose that effective T cell therapeutics may be enhanced by optimizing the inherent stochasticity of TCR-pMHC binding dynamics.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Authors updated to include two new authors; Author Affiliations updated to include recent positions; Introduction updated to provide an improved explanation of the potential mechanisms that contribute to T cell activation; Results (section 3) significantly updated to provide details of additional experimental data-sets that are consistent with our theory; Discussion updated to provide an improved explanation of how our model compares with other models of T cell activation in the literature; Methods updated to include experimental details of the previously unpublished data shown in Figure 4; Figure 1 revised to show how mechanisms can potentially generate an activating T cell signal; Figure 2 revised to explicitly state the parameter values used in each simulation; Figure 3 revised to clarify the labels on the y-axis; Figure 4 added to show exemplar data-sets that are consistent with theory; Table 1 added to show a summary of the parameter-values described in the literature that were adapted for our model parametrization; Supplementary Information (sections 2.2 and 2.3) updated to provide an explanation for the connection between Shannon entropy and variance; Supplementary Information (section 5) significantly updated to provide a similar alternative minimal model of T cell activation.

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Posted July 05, 2021.
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Fluctuations in TCR and pMHC interactions regulate T cell activation
Joseph R. Egan, Enas Abu-Shah, Omer Dushek, Tim Elliott, Ben D. MacArthur
bioRxiv 2021.02.09.430441; doi: https://doi.org/10.1101/2021.02.09.430441
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Fluctuations in TCR and pMHC interactions regulate T cell activation
Joseph R. Egan, Enas Abu-Shah, Omer Dushek, Tim Elliott, Ben D. MacArthur
bioRxiv 2021.02.09.430441; doi: https://doi.org/10.1101/2021.02.09.430441

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