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HaVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences
View ORCID ProfilePhuoc Truong Nguyen, View ORCID ProfileIlya Plyusnin, View ORCID ProfileTarja Sironen, View ORCID ProfileOlli Vapalahti, View ORCID ProfileRavi Kant, View ORCID ProfileTeemu Smura
doi: https://doi.org/10.1101/2021.02.12.431018
Phuoc Truong Nguyen
1Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
Ilya Plyusnin
2Institute of Biotechnology, University of Helsinki, Helsinki, Finland
3Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
Tarja Sironen
1Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
3Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
Olli Vapalahti
1Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
3Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
4Department of Virology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland
Ravi Kant
1Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
3Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland
Teemu Smura
1Department of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland
4Department of Virology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland
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Posted February 13, 2021.
HaVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences
Phuoc Truong Nguyen, Ilya Plyusnin, Tarja Sironen, Olli Vapalahti, Ravi Kant, Teemu Smura
bioRxiv 2021.02.12.431018; doi: https://doi.org/10.1101/2021.02.12.431018
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