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Close to optimal cell sensing ensures the robustness of tissue differentiation process: the avian photoreceptor mosaic case

Arnab Barua, Alireza Beygi, Haralampos Hatzikirou
doi: https://doi.org/10.1101/2021.02.14.431147
Arnab Barua
1Centre for Information Services and High Performance Computing, Technische Universität Dresden, Nöthnitzer Straße 46, 01062 Dresden, Germany
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Alireza Beygi
1Centre for Information Services and High Performance Computing, Technische Universität Dresden, Nöthnitzer Straße 46, 01062 Dresden, Germany
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Haralampos Hatzikirou
1Centre for Information Services and High Performance Computing, Technische Universität Dresden, Nöthnitzer Straße 46, 01062 Dresden, Germany
2Mathematics Department, Khalifa University, P.O. Box 127788, Abu Dhabi, UAE
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  • For correspondence: haralampos.hatzikirou@ku.ac.ae
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Abstract

The way that progenitor cell fate decisions and the associated environmental sensing are regulated to ensure the robustness of the spatial and temporal order in which cells are generated towards a fully differentiating tissue still remains elusive. Here, we investigate how cells regulate their sensing intensity and radius to guarantee the required thermodynamic robustness of a differentiated tissue. In particular, we are interested in finding the conditions where dedifferentiation at cell level is possible (microscopic reversibility) but tissue maintains its spatial order and differentiation integrity (macroscopic irreversibility). In order to tackle this, we exploit the recently postulated Least microEnvironmental Uncertainty Principle (LEUP) to develop a theory of stochastic thermodynamics for cell differentiation. To assess the predictive and explanatory power of our theory, we challenge it against the avian photoreceptor mosaic data. By calibrating a single parameter, the LEUP can predict the cone color spatial distribution in the avian retina and, at the same time, suggest that such a spatial pattern is associated with quasi-optimal cell sensing. By means of the stochastic thermodynamics formalism, we find out that thermodynamic robustness of differentiated tissues depends on cell metabolism and cell sensing properties. In turn, we calculate the limits of the cell sensing radius that ensure the robustness of differentiated tissue spatial order. Finally, we further constrain our model predictions to the avian photoreceptor mosaic.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted July 04, 2021.
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Close to optimal cell sensing ensures the robustness of tissue differentiation process: the avian photoreceptor mosaic case
Arnab Barua, Alireza Beygi, Haralampos Hatzikirou
bioRxiv 2021.02.14.431147; doi: https://doi.org/10.1101/2021.02.14.431147
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Close to optimal cell sensing ensures the robustness of tissue differentiation process: the avian photoreceptor mosaic case
Arnab Barua, Alireza Beygi, Haralampos Hatzikirou
bioRxiv 2021.02.14.431147; doi: https://doi.org/10.1101/2021.02.14.431147

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