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Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi

View ORCID ProfileElla V. Rodwell, Nicolas Wenner, View ORCID ProfileCaisey V. Pulford, Yueyi Cai, Arthur Bowers-Barnard, View ORCID ProfileAlison Beckett, View ORCID ProfileJonathan Rigby, View ORCID ProfileDavid M. Picton, View ORCID ProfileTim R. Blower, View ORCID ProfileNicholas A. Feasey, View ORCID ProfileJay C. D. Hinton, View ORCID ProfileBlanca M. Perez-Sepulveda
doi: https://doi.org/10.1101/2021.02.18.431836
Ella V. Rodwell
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Nicolas Wenner
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Caisey V. Pulford
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Yueyi Cai
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Arthur Bowers-Barnard
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Alison Beckett
2Biomedical Electron Microscopy Facility, University of Liverpool, Liverpool, UK
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Jonathan Rigby
4Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, UK
5Malawi Liverpool Wellcome Trust Clinical research programme, University of Malawi, The College of Medicine, Blantyre, Malawi
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David M. Picton
3Department of Biosciences, Durham University, Durham, UK
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Tim R. Blower
3Department of Biosciences, Durham University, Durham, UK
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Nicholas A. Feasey
4Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, UK
5Malawi Liverpool Wellcome Trust Clinical research programme, University of Malawi, The College of Medicine, Blantyre, Malawi
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Jay C. D. Hinton
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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Blanca M. Perez-Sepulveda
1Clinical Infection, Microbiology & Immunology, Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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  • For correspondence: blanca.m.perez@gmail.com
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Abstract

In recent years, novel lineages of invasive non-typhoidal Salmonella (iNTS) serovars Typhimurium and Enteritidis have been identified in patients with bloodstream infection in sub-Saharan Africa. Here, we isolated and characterised 32 phages capable of infecting S. Typhimurium and S. Enteritidis, from water sources in Malawi and the UK. The phages were classified in three major phylogenetic clusters that were geographically distributed. In terms of host range, Cluster 1 phages were able to infect all bacterial hosts tested, whereas Clusters 2 and 3 had a more restricted profile. Cluster 3 contained two sub-clusters, and 3.b contained the most novel isolates. This study represents the first exploration of the potential for phages to target the lineages of Salmonella that are responsible for bloodstream infections in sub-Saharan Africa.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵‡ NIHR HPRU in Gastrointestinal Infections at University of Liverpool, UK

  • Repositories: The data presented in this study are publicly available in GenBank, with accession numbers listed in Table 2.

  • GenBank accession numbers

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted February 22, 2021.
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Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi
Ella V. Rodwell, Nicolas Wenner, Caisey V. Pulford, Yueyi Cai, Arthur Bowers-Barnard, Alison Beckett, Jonathan Rigby, David M. Picton, Tim R. Blower, Nicholas A. Feasey, Jay C. D. Hinton, Blanca M. Perez-Sepulveda
bioRxiv 2021.02.18.431836; doi: https://doi.org/10.1101/2021.02.18.431836
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Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi
Ella V. Rodwell, Nicolas Wenner, Caisey V. Pulford, Yueyi Cai, Arthur Bowers-Barnard, Alison Beckett, Jonathan Rigby, David M. Picton, Tim R. Blower, Nicholas A. Feasey, Jay C. D. Hinton, Blanca M. Perez-Sepulveda
bioRxiv 2021.02.18.431836; doi: https://doi.org/10.1101/2021.02.18.431836

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