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Assembly of chromosome-scale and allele-aware autotetraploid genome of the Chinese alfalfa cultivar Zhongmu-4 and identification of SNP loci associated with 27 agronomic traits

Ruicai Long, Fan Zhang, View ORCID ProfileZhiwu Zhang, Mingna Li, Lin Chen, Xue Wang, Wenwen Liu, Tiejun Zhang, Long-Xi Yu, Fei He, Xueqian Jiang, Xijiang Yang, Changfu Yang, Zhen Wang, Junmei Kang, Qingchuan Yang
doi: https://doi.org/10.1101/2021.02.21.428692
Ruicai Long
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Fan Zhang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
2Department of Crop and Soil Sciences, Washington State University, Pullman, WA, USA
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Zhiwu Zhang
2Department of Crop and Soil Sciences, Washington State University, Pullman, WA, USA
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  • ORCID record for Zhiwu Zhang
Mingna Li
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Lin Chen
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Xue Wang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Wenwen Liu
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Tiejun Zhang
3School of Grassland Science, Beijing Forestry University, Beijing, China
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Long-Xi Yu
4United States Department of Agriculture-Agricultural Research Service, Plant Germplasm Introduction and Testing Research, Prosser, WA, USA
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Fei He
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Xueqian Jiang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Xijiang Yang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Changfu Yang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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Zhen Wang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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  • For correspondence: wangzhen@caas.cn kangjunmei@caas.cn qchyang66@163.com
Junmei Kang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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  • For correspondence: wangzhen@caas.cn kangjunmei@caas.cn qchyang66@163.com
Qingchuan Yang
1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
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  • For correspondence: wangzhen@caas.cn kangjunmei@caas.cn qchyang66@163.com
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Article Information

doi 
https://doi.org/10.1101/2021.02.21.428692
History 
  • February 22, 2021.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.

Author Information

  1. Ruicai Long1,†,
  2. Fan Zhang1,2,†,
  3. Zhiwu Zhang2,
  4. Mingna Li1,
  5. Lin Chen1,
  6. Xue Wang1,
  7. Wenwen Liu1,
  8. Tiejun Zhang3,
  9. Long-Xi Yu4,
  10. Fei He1,
  11. Xueqian Jiang1,
  12. Xijiang Yang1,
  13. Changfu Yang1,
  14. Zhen Wang1,*,
  15. Junmei Kang1,* and
  16. Qingchuan Yang1,*
  1. 1Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
  2. 2Department of Crop and Soil Sciences, Washington State University, Pullman, WA, USA
  3. 3School of Grassland Science, Beijing Forestry University, Beijing, China
  4. 4United States Department of Agriculture-Agricultural Research Service, Plant Germplasm Introduction and Testing Research, Prosser, WA, USA
  1. ↵*Correspondence (Tel +86-10-62815996; fax +86-10-62816357; emails wangzhen{at}caas.cn (Z.W), kangjunmei{at}caas.cn (J.K) and qchyang66{at}163.com (Q.Y))
  1. ↵† These authors contributed equally to this work.

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Assembly of chromosome-scale and allele-aware autotetraploid genome of the Chinese alfalfa cultivar Zhongmu-4 and identification of SNP loci associated with 27 agronomic traits
Ruicai Long, Fan Zhang, Zhiwu Zhang, Mingna Li, Lin Chen, Xue Wang, Wenwen Liu, Tiejun Zhang, Long-Xi Yu, Fei He, Xueqian Jiang, Xijiang Yang, Changfu Yang, Zhen Wang, Junmei Kang, Qingchuan Yang
bioRxiv 2021.02.21.428692; doi: https://doi.org/10.1101/2021.02.21.428692
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Assembly of chromosome-scale and allele-aware autotetraploid genome of the Chinese alfalfa cultivar Zhongmu-4 and identification of SNP loci associated with 27 agronomic traits
Ruicai Long, Fan Zhang, Zhiwu Zhang, Mingna Li, Lin Chen, Xue Wang, Wenwen Liu, Tiejun Zhang, Long-Xi Yu, Fei He, Xueqian Jiang, Xijiang Yang, Changfu Yang, Zhen Wang, Junmei Kang, Qingchuan Yang
bioRxiv 2021.02.21.428692; doi: https://doi.org/10.1101/2021.02.21.428692

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