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Trends in community- and nosocomial-acquired infections of carbapenem resistant Enterobacteriaceae (CRE), carbapenemase producing Enterobacteriaceae (CPE) and vancomycin resistant Enterococcus (VRE): a 10-year prospective observational study

Gloria Maritza Ubillus Arriola, William Araujo Banchon, Lilian Patiño Gabriel, Lenka Kolevic, María del Carmen Quispe Manco, José María Olivo Lopez, Armando Barrientos Achata, Maria Elena Revilla Velasquez, Donia Bouzid, View ORCID ProfileEnrique Casalino
doi: https://doi.org/10.1101/2021.02.22.432249
Gloria Maritza Ubillus Arriola
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
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William Araujo Banchon
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
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Lilian Patiño Gabriel
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
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Lenka Kolevic
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
3Infectious diseases unit, Instituto Nacional del Niño. Lima, Peru
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María del Carmen Quispe Manco
2Laboratory of Microbiology, Instituto Nacional del Niño. Lima, Peru
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José María Olivo Lopez
2Laboratory of Microbiology, Instituto Nacional del Niño. Lima, Peru
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Armando Barrientos Achata
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
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Maria Elena Revilla Velasquez
1Oficina Ejecutiva de Apoyo a la Investigación y Docencia Especializada (OEAIDE), Instituto Nacional de Salud del Niño. Lima, Peru
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Donia Bouzid
4Université de Paris, AP-HP, Hôpital Bichat, DMU INVICTUS, IAME UMR 1137, INSERM, Paris, France
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Enrique Casalino
4Université de Paris, AP-HP, Hôpital Bichat, DMU INVICTUS, IAME UMR 1137, INSERM, Paris, France
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  • ORCID record for Enrique Casalino
  • For correspondence: enrique.casalino@aphp.fr
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Abstract

Introduction CRE, CPE, and VRE are considered significant threats to public health.

Aim To determine trends of nosocomial- and community-acquired infections.

Methods A 10-year prospective observational non-interventional study was conducted. We used time-series analysis to evaluate trends in infections number.

Findings Infection rate (%) were: CRE 2.48 (261/10,533), CPE 1.66 (175/10,533) and VRE 15.9 (121/761). We found diminishing trends for CRE (−19% [−31;−5], P=.03) and CPE (−22% [−30;−8], P=.04) but increasing trend for VRE (+48; [CI95% 34;75], P=.001). While we found decreasing trends for CRE and CPE in emergency (−71 [−122;−25], P=.001; −45 [−92;−27], P=.001) and hospitalization (−127 [−159; −85], P=.001; −56 [−98;−216], P=.01), we found increasing trends for VRE (+148 [113;192], P=.00001; +108[65;152], P=.003). Nosocomial-infections fell in CRE (−238 [−183;−316], P=.0001) and CPE (−163 [−96; −208], P=.001), but rose in VRE (+196 [151;242], P=.0001). We showed increasing trends in ambulatory and community-acquired infections in CRE (+134% [96;189]; P=.001; +77% [52;89]; P= .002), CPE (+288 [226;343]; P=.0001; +21% [−12;46]; P=.0.08) and VRE (+348 [295;458]; P=.0001; +66% [41;83]; P=.003). Direct admitted trends rose in all groups (CRE 16% [−8; 42]; P=.05), CPE 23% [−6; 48] (P=.05) and VRE (+241 [188; 301]; P=.0001).

Conclusions We found a changing infection pattern with decreasing trends in in-hospital settings and nosocomial-acquired infections but increasing ambulatory and community-acquired infections. The observed increasing-trends in direct-admitted could be explained by community-onset infections diagnosed in the hospital. Our findings highlight the need to identify CRE/CPE/VRE community-acquired infections in ambulatory and in-hospital settings.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted February 22, 2021.
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Trends in community- and nosocomial-acquired infections of carbapenem resistant Enterobacteriaceae (CRE), carbapenemase producing Enterobacteriaceae (CPE) and vancomycin resistant Enterococcus (VRE): a 10-year prospective observational study
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Trends in community- and nosocomial-acquired infections of carbapenem resistant Enterobacteriaceae (CRE), carbapenemase producing Enterobacteriaceae (CPE) and vancomycin resistant Enterococcus (VRE): a 10-year prospective observational study
Gloria Maritza Ubillus Arriola, William Araujo Banchon, Lilian Patiño Gabriel, Lenka Kolevic, María del Carmen Quispe Manco, José María Olivo Lopez, Armando Barrientos Achata, Maria Elena Revilla Velasquez, Donia Bouzid, Enrique Casalino
bioRxiv 2021.02.22.432249; doi: https://doi.org/10.1101/2021.02.22.432249
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Trends in community- and nosocomial-acquired infections of carbapenem resistant Enterobacteriaceae (CRE), carbapenemase producing Enterobacteriaceae (CPE) and vancomycin resistant Enterococcus (VRE): a 10-year prospective observational study
Gloria Maritza Ubillus Arriola, William Araujo Banchon, Lilian Patiño Gabriel, Lenka Kolevic, María del Carmen Quispe Manco, José María Olivo Lopez, Armando Barrientos Achata, Maria Elena Revilla Velasquez, Donia Bouzid, Enrique Casalino
bioRxiv 2021.02.22.432249; doi: https://doi.org/10.1101/2021.02.22.432249

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