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Single cell trajectory analysis of human pluripotent stem cells differentiating towards lung and hepatocyte progenitors

Chaido Ori, Meshal Ansari, Ilias Angelidis, Fabian J. Theis, Herbert B. Schiller, Micha Drukker
doi: https://doi.org/10.1101/2021.02.23.432413
Chaido Ori
1Institute of Stem Cell Research, Helmholtz Center Munich, Neuherberg, Munich, Germany
2Institute of Lung Biology and Disease (ILBD), Helmholtz Zentrum München, Member of the German Center for Lung Research (DZL), Munich, Germany
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Meshal Ansari
2Institute of Lung Biology and Disease (ILBD), Helmholtz Zentrum München, Member of the German Center for Lung Research (DZL), Munich, Germany
3Institute of Computational Biology, Neuherberg, Munich, Germany
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Ilias Angelidis
2Institute of Lung Biology and Disease (ILBD), Helmholtz Zentrum München, Member of the German Center for Lung Research (DZL), Munich, Germany
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Fabian J. Theis
3Institute of Computational Biology, Neuherberg, Munich, Germany
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Herbert B. Schiller
2Institute of Lung Biology and Disease (ILBD), Helmholtz Zentrum München, Member of the German Center for Lung Research (DZL), Munich, Germany
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  • For correspondence: herbert.schiller@helmholtz-muenchen.de micha.drukker@helmholtz-muenchen.de m.drukker@lacdr.leidenuniv.nl
Micha Drukker
1Institute of Stem Cell Research, Helmholtz Center Munich, Neuherberg, Munich, Germany
4Division of Drug Discovery and Safety, Leiden Academic Centre for Drug Research (LACDR), Leiden University, Leiden, The Netherlands
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  • For correspondence: herbert.schiller@helmholtz-muenchen.de micha.drukker@helmholtz-muenchen.de m.drukker@lacdr.leidenuniv.nl
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  • Table S1 List and catalogue numbers of reagents[supplements/432413_file02.docx]
  • Table S2 Single-cell level meta data[supplements/432413_file03.xlsx]
  • Table S3 Marker genes of louvain clusters[supplements/432413_file04.xlsx]
  • Table S4 Results of spline fit[supplements/432413_file05.xlsx]
  • Table S5 Hierarchical clustering of genes[supplements/432413_file06.xlsx]
  • Table S6 Differential gene expression along trajectories[supplements/432413_file07.xlsx]
  • Table S7 Gene-Gene correlations[supplements/432413_file08.xlsx]
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Posted February 23, 2021.
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Single cell trajectory analysis of human pluripotent stem cells differentiating towards lung and hepatocyte progenitors
Chaido Ori, Meshal Ansari, Ilias Angelidis, Fabian J. Theis, Herbert B. Schiller, Micha Drukker
bioRxiv 2021.02.23.432413; doi: https://doi.org/10.1101/2021.02.23.432413
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Single cell trajectory analysis of human pluripotent stem cells differentiating towards lung and hepatocyte progenitors
Chaido Ori, Meshal Ansari, Ilias Angelidis, Fabian J. Theis, Herbert B. Schiller, Micha Drukker
bioRxiv 2021.02.23.432413; doi: https://doi.org/10.1101/2021.02.23.432413

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