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The FDA-approved drug cobicistat synergizes with remdesivir to inhibit SARS-CoV-2 replication

View ORCID ProfileIart Luca Shytaj, Mohamed Fares, Bojana Lucic, Lara Gallucci, Mahmoud M. Tolba, Liv Zimmermann, Ahmed Taha Ayoub, Mirko Cortese, Christopher J. Neufeldt, Vibor Laketa, Petr Chlanda, Oliver T. Fackler, Steeve Boulant, Ralf Bartenschlager, Megan Stanifer, Andrea Savarino, Marina Lusic
doi: https://doi.org/10.1101/2021.03.09.434219
Iart Luca Shytaj
1Department of Infectious Diseases, Integrative Virology, Heidelberg University, Heidelberg, Germany
2Federal University of São Paulo, Infectious Diseases Department, São Paulo, Brazil
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  • ORCID record for Iart Luca Shytaj
  • For correspondence: shytaj.luca@unifesp.br
Mohamed Fares
3Department of Hydrobiology, Veterinary Research Division, National Research Centre, Cairo, Egypt
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Bojana Lucic
1Department of Infectious Diseases, Integrative Virology, Heidelberg University, Heidelberg, Germany
4German Center for Infection Research (DZIF), Heidelberg, Germany
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Lara Gallucci
1Department of Infectious Diseases, Integrative Virology, Heidelberg University, Heidelberg, Germany
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Mahmoud M. Tolba
5Pharmaceutical Division, Ministry of Health and Population, Faiyum, Egypt
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Liv Zimmermann
6Department of Infectious Diseases, Virology, CIID, Heidelberg University Hospital, Heidelberg, Germany
7Schaller Research Groups, Center of Infectious Diseases, Virology, Heidelberg University Hospital, Heidelberg, Germany
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Ahmed Taha Ayoub
8Biomolecular Simulation Center, Department of Pharmaceutical Chemistry, Heliopolis University, Cairo, Egypt
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Mirko Cortese
9Department of Infectious Diseases, Molecular Virology, CIID, Heidelberg University, Heidelberg, Germany
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Christopher J. Neufeldt
9Department of Infectious Diseases, Molecular Virology, CIID, Heidelberg University, Heidelberg, Germany
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Vibor Laketa
4German Center for Infection Research (DZIF), Heidelberg, Germany
6Department of Infectious Diseases, Virology, CIID, Heidelberg University Hospital, Heidelberg, Germany
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Petr Chlanda
6Department of Infectious Diseases, Virology, CIID, Heidelberg University Hospital, Heidelberg, Germany
7Schaller Research Groups, Center of Infectious Diseases, Virology, Heidelberg University Hospital, Heidelberg, Germany
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Oliver T. Fackler
1Department of Infectious Diseases, Integrative Virology, Heidelberg University, Heidelberg, Germany
4German Center for Infection Research (DZIF), Heidelberg, Germany
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Steeve Boulant
6Department of Infectious Diseases, Virology, CIID, Heidelberg University Hospital, Heidelberg, Germany
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Ralf Bartenschlager
4German Center for Infection Research (DZIF), Heidelberg, Germany
9Department of Infectious Diseases, Molecular Virology, CIID, Heidelberg University, Heidelberg, Germany
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Megan Stanifer
9Department of Infectious Diseases, Molecular Virology, CIID, Heidelberg University, Heidelberg, Germany
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Andrea Savarino
10Department of Infectious and Immune-Mediated Diseases, Italian Institute of Health, Rome, Italy
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Marina Lusic
1Department of Infectious Diseases, Integrative Virology, Heidelberg University, Heidelberg, Germany
4German Center for Infection Research (DZIF), Heidelberg, Germany
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Abstract

Combinations of direct-acting antivirals are needed to minimize drug-resistance mutations and stably suppress replication of RNA viruses. Currently, there are limited therapeutic options against the Severe Acute Respiratory Syndrome Corona Virus 2 (SARS-CoV-2) and testing of a number of drug regimens has led to conflicting results. Here we show that cobicistat, which is an-FDA approved drug-booster that blocks the activity of the drug metabolizing proteins Cytochrome P450-3As (CYP3As) and P-glycoprotein (P-gp), inhibits SARS-CoV-2 replication. Cell-to-cell membrane fusion assays indicated that the antiviral effect of cobicistat is exerted through inhibition of spike protein-mediated membrane fusion. In line with this, incubation with low micromolar concentrations of cobicistat decreased viral replication in three different cell lines including cells of lung and gut origin. When cobicistat was used in combination with the putative CYP3A target and nucleoside analog remdesivir, a synergistic effect on the inhibition of viral replication was observed in cell lines and in a primary human colon organoid. The cobicistat/remdesivir combination was able to potently abate viral replication to levels comparable to mock-infected cells leading to an almost complete rescue of infected cell viability. These data highlight cobicistat as a therapeutic candidate for treating SARS-CoV-2 infection and as a potential building block of combination therapies for COVID-19.

Competing Interest Statement

Heidelberg University Hospital has requested patent rights on the use of cobicistat for treatment of coronavirus infection and I.L.S., M.M.T., M.F., A.A., A.S., and M.L. are inventors of this patent application.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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The FDA-approved drug cobicistat synergizes with remdesivir to inhibit SARS-CoV-2 replication
Iart Luca Shytaj, Mohamed Fares, Bojana Lucic, Lara Gallucci, Mahmoud M. Tolba, Liv Zimmermann, Ahmed Taha Ayoub, Mirko Cortese, Christopher J. Neufeldt, Vibor Laketa, Petr Chlanda, Oliver T. Fackler, Steeve Boulant, Ralf Bartenschlager, Megan Stanifer, Andrea Savarino, Marina Lusic
bioRxiv 2021.03.09.434219; doi: https://doi.org/10.1101/2021.03.09.434219
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The FDA-approved drug cobicistat synergizes with remdesivir to inhibit SARS-CoV-2 replication
Iart Luca Shytaj, Mohamed Fares, Bojana Lucic, Lara Gallucci, Mahmoud M. Tolba, Liv Zimmermann, Ahmed Taha Ayoub, Mirko Cortese, Christopher J. Neufeldt, Vibor Laketa, Petr Chlanda, Oliver T. Fackler, Steeve Boulant, Ralf Bartenschlager, Megan Stanifer, Andrea Savarino, Marina Lusic
bioRxiv 2021.03.09.434219; doi: https://doi.org/10.1101/2021.03.09.434219

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