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Micrometer-resolution reconstruction and analysis of whole mouse brain vasculature by synchrotron-based phase-contrast tomographic microscopy

View ORCID ProfileArttu Miettinen, View ORCID ProfileAntonio G. Zippo, View ORCID ProfileAlessandra Patera, View ORCID ProfileAnne Bonnin, Sarah H. Shahmoradian, Gabriele E. M. Biella, View ORCID ProfileMarco Stampanoni
doi: https://doi.org/10.1101/2021.03.16.435616
Arttu Miettinen
1Institute for Biomedical Engineering, University and ETH Zurich, Zurich, Switzerland
2Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland
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  • For correspondence: arttu.i.miettinen@jyu.fi antonio.zippo@in.cnr.it
Antonio G. Zippo
3Institute of Neuroscience, Consiglio Nazionale delle Ricerche, Milan, Italy
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  • ORCID record for Antonio G. Zippo
  • For correspondence: arttu.i.miettinen@jyu.fi antonio.zippo@in.cnr.it
Alessandra Patera
2Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland
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Anne Bonnin
2Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland
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Sarah H. Shahmoradian
4Center for Cellular Imaging and NanoAnalytics (C-CINA), Biozentrum, University of Basel, Switzerland
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Gabriele E. M. Biella
3Institute of Neuroscience, Consiglio Nazionale delle Ricerche, Milan, Italy
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Marco Stampanoni
1Institute for Biomedical Engineering, University and ETH Zurich, Zurich, Switzerland
2Swiss Light Source, Paul Scherrer Institute, Villigen, Switzerland
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Abstract

Nervous tissue metabolism is mainly supported by the dense thread of blood vessels which mainly provides fast supplies of oxygen and glucose. Recently, the supplying role of the brain vascular system has been examined in major neurological conditions such as the Alzheimer’s and Parkinson’s diseases. However, to date, fast and reliable methods for the fine level microstructural extraction of whole brain vascular systems are still unavailable. We present a methodological framework suitable for reconstruction of the whole mouse brain cerebral microvasculature by X-ray tomography with the unprecedented pixel size of 0.65 μm. Our measurements suggest that the resolving power of the technique is better than in many previous studies, and therefore it allows for a refinement of current measurements of blood vessel properties. Relevant insights emerged from analyses characterizing the regional morphology and topology of blood vessels. Specifically, vascular diameter and density appeared non-homogeneously distributed among the brain regions suggesting preferential sites for high-demanding metabolic requirements. Also, topological features such as the vessel branching points were non-uniformly distributed among the brain districts indicating that specific architectural schemes are required to serve the distinct functional specialization of the nervous tissue. In conclusion, here we propose a combination of experimental and computational method for efficient and fast investigations of the vascular system of entire organs with submicrometric precision.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted March 16, 2021.
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Micrometer-resolution reconstruction and analysis of whole mouse brain vasculature by synchrotron-based phase-contrast tomographic microscopy
Arttu Miettinen, Antonio G. Zippo, Alessandra Patera, Anne Bonnin, Sarah H. Shahmoradian, Gabriele E. M. Biella, Marco Stampanoni
bioRxiv 2021.03.16.435616; doi: https://doi.org/10.1101/2021.03.16.435616
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Micrometer-resolution reconstruction and analysis of whole mouse brain vasculature by synchrotron-based phase-contrast tomographic microscopy
Arttu Miettinen, Antonio G. Zippo, Alessandra Patera, Anne Bonnin, Sarah H. Shahmoradian, Gabriele E. M. Biella, Marco Stampanoni
bioRxiv 2021.03.16.435616; doi: https://doi.org/10.1101/2021.03.16.435616

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