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Parental-fetal interplay of immune genes leads to intrauterine growth restriction

View ORCID ProfileGurman Kaur, Caroline B. M. Porter, Orr Ashenberg, Jack Lee, Samantha J. Riesenfeld, Matan Hofree, Maria Aggelakopoulou, Ayshwarya Subramanian, Subita Balaram Kuttikkatte, Kathrine E. Attfield, Christiane A. E. Desel, Jessica L. Davies, Hayley G. Evans, Inbal Avraham-Davidi, Lan T. Nguyen, Danielle A. Dionne, Anna E. Neumann, Lise Torp Jensen, Thomas R. Barber, Elizabeth Soilleux, Mary Carrington, View ORCID ProfileGil McVean, Orit Rozenblatt-Rosen, Aviv Regev, Lars Fugger
doi: https://doi.org/10.1101/2021.03.26.437292
Gurman Kaur
1MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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  • ORCID record for Gurman Kaur
Caroline B. M. Porter
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Orr Ashenberg
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Jack Lee
3Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King’s College London, London, UK
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Samantha J. Riesenfeld
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
4Pritzker School of Molecular Engineering, University of Chicago, Chicago, IL, USA
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Matan Hofree
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Maria Aggelakopoulou
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Ayshwarya Subramanian
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Subita Balaram Kuttikkatte
1MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Kathrine E. Attfield
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Christiane A. E. Desel
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
6University Department of Neurology, University Hospital Magdeburg, Germany
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Jessica L. Davies
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Hayley G. Evans
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Inbal Avraham-Davidi
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Lan T. Nguyen
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Danielle A. Dionne
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Anna E. Neumann
7Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Lise Torp Jensen
8Department of Clinical Medicine, Aarhus University Hospital, Aarhus, Denmark
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Thomas R. Barber
1MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
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Elizabeth Soilleux
9Department of Pathology, Tennis Court Rd, University of Cambridge
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Mary Carrington
10Basic Science Program, Frederick National Laboratory for Cancer Research in the Laboratory of Integrative Cancer Immunology, National Cancer Institute, Bethesda, MD USA
11Ragon Institute of MGH, MIT, and Harvard, Cambridge, MA USA
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Gil McVean
12Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK
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Orit Rozenblatt-Rosen
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
13Genentech, 1 DNA Way, South San Francisco, CA, USA
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Aviv Regev
2Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA
13Genentech, 1 DNA Way, South San Francisco, CA, USA
14Massachusetts Institute of Technology, Department of Biology, Cambridge, MA, USA
15Howard Hughes Medical Institute, Chevy Chase, MD, USA
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  • For correspondence: lars.fugger@ndcn.ox.ac.uk aregev@broadinstitute.org
Lars Fugger
1MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
5Oxford Centre for Neuroinflammation, Nuffield Department of Clinical Neurosciences, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK
8Department of Clinical Medicine, Aarhus University Hospital, Aarhus, Denmark
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  • For correspondence: lars.fugger@ndcn.ox.ac.uk aregev@broadinstitute.org
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Abstract

Intrauterine growth restriction (IUGR) of fetuses affects 5-10% of pregnancies and is associated with perinatal morbidity, mortality and long-term health issues. Understanding genetic predisposition to IUGR is challenging, owing to extensive gene polymorphisms, linkage disequilibrium, and maternal and paternal influence. Here, we demonstrate that the inhibitory receptor, KIR2DL1, expressed on maternal uterine natural killer (uNK) cells, in interaction with the paternally-inherited HLA-C*05, an HLA-C group 2 allotype, expressed on fetal trophoblast cells, causes IUGR in a humanised mouse model. Micro-CT imaging of the uteroplacental vasculature revealed reduced uterine spiral artery diameter and increased segment length, increasing fetal blood flow resistance. Single cell RNA-Seq from the maternal-fetal interface highlighted expression programs activated by KIR2DL1-induced IUGR in several placental cell types, including degradation of extracellular matrix components, angiogenesis, and uNK cell communication, suggesting a complex response underlying IUGR. As current IUGR treatments are insufficient, our findings provide important insight for drug development.

Competing Interest Statement

A.R. is a co-founder and equity holder of Celsius Therapeutics, an equity holder in Immunitas, and was an SAB member of ThermoFisher Scientific, Syros Pharmaceuticals, Neogene Therapeutics and Asimov until July 31, 2020. From August 1, 2020, A.R. is an employee of Genentech. O.R.-R is an employee of Genentech as of October 19, 2020. O.A., O.R.-R. and A.R. are co-inventors on patent applications filed by the Broad Institute for inventions related to single cell genomics, such as in PCT/US2018/060860 and US provisional application no. 62/745,259. G.M. is a director of and shareholder in Genomics plc and a partner in Peptide Groove LLP.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Parental-fetal interplay of immune genes leads to intrauterine growth restriction
Gurman Kaur, Caroline B. M. Porter, Orr Ashenberg, Jack Lee, Samantha J. Riesenfeld, Matan Hofree, Maria Aggelakopoulou, Ayshwarya Subramanian, Subita Balaram Kuttikkatte, Kathrine E. Attfield, Christiane A. E. Desel, Jessica L. Davies, Hayley G. Evans, Inbal Avraham-Davidi, Lan T. Nguyen, Danielle A. Dionne, Anna E. Neumann, Lise Torp Jensen, Thomas R. Barber, Elizabeth Soilleux, Mary Carrington, Gil McVean, Orit Rozenblatt-Rosen, Aviv Regev, Lars Fugger
bioRxiv 2021.03.26.437292; doi: https://doi.org/10.1101/2021.03.26.437292
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Parental-fetal interplay of immune genes leads to intrauterine growth restriction
Gurman Kaur, Caroline B. M. Porter, Orr Ashenberg, Jack Lee, Samantha J. Riesenfeld, Matan Hofree, Maria Aggelakopoulou, Ayshwarya Subramanian, Subita Balaram Kuttikkatte, Kathrine E. Attfield, Christiane A. E. Desel, Jessica L. Davies, Hayley G. Evans, Inbal Avraham-Davidi, Lan T. Nguyen, Danielle A. Dionne, Anna E. Neumann, Lise Torp Jensen, Thomas R. Barber, Elizabeth Soilleux, Mary Carrington, Gil McVean, Orit Rozenblatt-Rosen, Aviv Regev, Lars Fugger
bioRxiv 2021.03.26.437292; doi: https://doi.org/10.1101/2021.03.26.437292

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