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Membrane lectins enhance SARS-CoV-2 infection and influence the neutralizing activity of different classes of antibodies

Florian A. Lempp, Leah Soriaga, View ORCID ProfileMartin Montiel-Ruiz, View ORCID ProfileFabio Benigni, Julia Noack, Young-Jun Park, View ORCID ProfileSiro Bianchi, View ORCID ProfileAlexandra C. Walls, View ORCID ProfileJohn E. Bowen, Jiayi Zhou, Hannah Kaiser, Maria Agostini, Marcel Meury, Exequiel Dellota Jr., View ORCID ProfileStefano Jaconi, View ORCID ProfileElisabetta Cameroni, View ORCID ProfileHerbert W. Virgin, View ORCID ProfileAntonio Lanzavecchia, View ORCID ProfileDavid Veesler, View ORCID ProfileLisa Purcell, View ORCID ProfileAmalio Telenti, View ORCID ProfileDavide Corti
doi: https://doi.org/10.1101/2021.04.03.438258
Florian A. Lempp
1Vir Biotechnology, San Francisco, CA 94158, USA
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Leah Soriaga
1Vir Biotechnology, San Francisco, CA 94158, USA
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Martin Montiel-Ruiz
1Vir Biotechnology, San Francisco, CA 94158, USA
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Fabio Benigni
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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Julia Noack
1Vir Biotechnology, San Francisco, CA 94158, USA
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Young-Jun Park
3Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
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Siro Bianchi
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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Alexandra C. Walls
3Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
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John E. Bowen
3Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
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Jiayi Zhou
1Vir Biotechnology, San Francisco, CA 94158, USA
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Hannah Kaiser
1Vir Biotechnology, San Francisco, CA 94158, USA
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Maria Agostini
1Vir Biotechnology, San Francisco, CA 94158, USA
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Marcel Meury
1Vir Biotechnology, San Francisco, CA 94158, USA
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Exequiel Dellota Jr.
1Vir Biotechnology, San Francisco, CA 94158, USA
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Stefano Jaconi
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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Elisabetta Cameroni
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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Herbert W. Virgin
1Vir Biotechnology, San Francisco, CA 94158, USA
4Department of Pathology and Immunology, Washington University School of Medicine, Saint Louis MO 63110, USA
5Department of Internal Medicine, UT Southwestern Medical Center, Dallas, TX 75390, USA
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Antonio Lanzavecchia
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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David Veesler
3Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
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Lisa Purcell
6Vir Biotechnology, St Louis, MO, 63110, USA
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Amalio Telenti
1Vir Biotechnology, San Francisco, CA 94158, USA
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  • For correspondence: atelenti@vir.bio dcorti@vir.bio
Davide Corti
2Humabs Biomed SA, a subsidiary of Vir Biotechnology, 6500 Bellinzona, Switzerland
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  • For correspondence: atelenti@vir.bio dcorti@vir.bio
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Abstract

Investigating the mechanisms of SARS-CoV-2 cellular infection is key to better understand COVID-19 immunity and pathogenesis. Infection, which involves both cell attachment and membrane fusion, relies on the ACE2 receptor that is paradoxically found at low levels in the respiratory tract, suggesting that additional mechanisms facilitating infection may exist. Here we show that C-type lectin receptors, DC-SIGN, L-SIGN and the sialic acid-binding Ig-like lectin 1 (SIGLEC1) function as auxiliary receptors by enhancing ACE2-mediated infection and modulating the neutralizing activity of different classes of spike-specific antibodies. Antibodies to the N-terminal domain (NTD) or to the conserved proteoglycan site at the base of the Receptor Binding Domain (RBD), while poorly neutralizing infection of ACE2 over-expressing cells, effectively block lectin-facilitated infection. Conversely, antibodies to the Receptor Binding Motif (RBM), while potently neutralizing infection of ACE2 over-expressing cells, poorly neutralize infection of cells expressing DC-SIGN or L-SIGN and trigger fusogenic rearrangement of the spike promoting cell-to-cell fusion. Collectively, these findings identify a lectin-dependent pathway that enhances ACE2-dependent infection by SARS-CoV-2 and reveal distinct mechanisms of neutralization by different classes of spike-specific antibodies.

Competing Interest Statement

F.A.L, L.S., F.B., S.B., M.M-R., J.N., J.Z, H.K., M.A., M.M., E.D., S.J., E.C., H.W.V., A.L., L.P, A.T. and D.C. are employees of Vir Biotechnology and may hold shares in Vir Biotechnology. H.W.V. is a founder of PierianDx and Casma Therapeutics. L.P. is a former employee and shareholder in Regeneron Pharmaceuticals. Neither company provided funding for this work or is performing related work. D.V. is a consultant for Vir Biotechnology Inc. The Veesler laboratory has received a sponsored research agreement from Vir Biotechnology Inc. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted April 04, 2021.
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Membrane lectins enhance SARS-CoV-2 infection and influence the neutralizing activity of different classes of antibodies
Florian A. Lempp, Leah Soriaga, Martin Montiel-Ruiz, Fabio Benigni, Julia Noack, Young-Jun Park, Siro Bianchi, Alexandra C. Walls, John E. Bowen, Jiayi Zhou, Hannah Kaiser, Maria Agostini, Marcel Meury, Exequiel Dellota Jr., Stefano Jaconi, Elisabetta Cameroni, Herbert W. Virgin, Antonio Lanzavecchia, David Veesler, Lisa Purcell, Amalio Telenti, Davide Corti
bioRxiv 2021.04.03.438258; doi: https://doi.org/10.1101/2021.04.03.438258
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Membrane lectins enhance SARS-CoV-2 infection and influence the neutralizing activity of different classes of antibodies
Florian A. Lempp, Leah Soriaga, Martin Montiel-Ruiz, Fabio Benigni, Julia Noack, Young-Jun Park, Siro Bianchi, Alexandra C. Walls, John E. Bowen, Jiayi Zhou, Hannah Kaiser, Maria Agostini, Marcel Meury, Exequiel Dellota Jr., Stefano Jaconi, Elisabetta Cameroni, Herbert W. Virgin, Antonio Lanzavecchia, David Veesler, Lisa Purcell, Amalio Telenti, Davide Corti
bioRxiv 2021.04.03.438258; doi: https://doi.org/10.1101/2021.04.03.438258

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