ABSTRACT
PET, CSF and plasma biomarkers of tau pathology may be differentially associated with Alzheimer’s disease (AD) related demographic, cognitive, genetic and neuroimaging markers. We examined 771 participants with normal cognition, mild cognitive impairment or dementia from BioFINDER-2 (n=400) and ADNI (n=371). All had tau-PET ([18F]RO948 in BioFINDER-2, [18F]flortaucipir in ADNI) and CSF p-tau181 biomarkers available. Plasma p-tau181 and plasma/CSF p-tau217 were available in BioFINDER-2 only. Concordance between PET, CSF and plasma tau biomarkers ranged between 66% and 95%. Across the whole group, ridge regression models showed that increased CSF and plasma p-tau181 and p-tau217 levels were independently of tau PET associated with higher age, and APOEε4-carriership and Aβ-positivity, while increased tau-PET signal in the temporal cortex was associated with worse cognitive performance and reduced cortical thickness. We conclude that biofluid and neuroimaging markers of tau pathology convey partly independent information, with CSF and plasma p-tau181 and p-tau217 levels being more tightly linked with early markers of AD (especially Aβ pathology), while tau-PET shows the strongest associations with cognitive and neurodegenerative markers of disease progression.
INTRODUCTION
The core neuropathological features of Alzheimer’s disease (AD) are amyloid-β (Aβ) plaques and hyperphosphorylated tau (p-tau) in neuronal neurofibrillary tangles and neuropil threads.1 While Aβ pathology is often considered a key initiator of AD development (potentially through facilitating the spread of tau pathology2), the phosphorylation, release and aggregation of tau proteins is tightly linked to the clinical and biological progression of AD.3-7 Major scientific breakthroughs over the past decades now enable the detection of tau pathology in cerebrospinal fluid (CSF), using positron emission tomography (PET) and, most recently, in blood.8-11
Although these three biomarker modalities are reflecting tau pathology, there are important differences between them. For example, in CSF and plasma specific soluble variants of tau (e.g., p-tau181 or p-tau217) are measured,12-18 while tau PET ligands bind aggregated non-soluble paired helical filaments of tau.19-23 PET and fluid biomarkers thus measure different aspects of abnormalities in tau metabolism. Moreover, previous studies have shown that CSF p-tau markers become abnormal prior to tau PET and may thus be more sensitive biomarkers for early AD.24-26 Similarly, there is emerging evidence that alterations in plasma p-tau levels also occur early in the disease process.4,17,27-31 Despite the aforementioned differences among biofluid- and PET-based tau biomarkers, they are often considered interchangeable. For example, CSF p-tau and tau PET are both incorporated as markers of tau pathology in the most recent research criteria for AD32, and both can be used to define “T” (tau) status in the AT(N) classification system.33
In this study, we investigated whether PET, CSF and plasma biomarkers of tau pathology are differentially associated with AD-related demographic, cognitive, genetic and neuroimaging markers. We hypothesized that the three modalities would show significant differences in associations with distinct AD features, and thus partially convey independent information. Exploring this hypothesis might provide insight into the clinical and neurobiological factors related to discrepant results between PET-, CSF- and blood-based biomarkers of tau pathology. Additionally, in light of the recent FDA approval of one of the tau PET tracers (i.e., [18F]flortaucipir34), and the rapid development of blood-based p-tau biomarkers, clinicians in specialized care settings may soon have multiple tau biomarker options at their disposal. It is therefore of high clinical relevance to determine the degree of agreement between the tau biomarkers and to identify potential scenarios where one tau biomarker might be preferred over the other(s).
RESULTS
Study participants
For this study, we stratified participants by their cognitive status into cognitively unimpaired (CU) and symptomatic groups (combining MCI and dementia, Table 1). As expected in both BioFINDER-2 and ADNI, participants in the symptomatic group were older, had more often pathological levels of both tau and Aβ biomarkers, and demonstrated worse cognitive performance and greater atrophy on MRI compared to CU individuals.
Associations between tau biomarkers and AD-related features
First, we examined the correlations between continuous tau biomarkers and other AD-related features. Overall, there was a moderate to strong positive correlation between PET, CSF and plasma tau biomarkers (range: 0.46-0.98, all p<0.001, Figure 1a). In addition, tau biomarkers were positively correlated with age (range: 0.22 for plasma p-tau217 to 0.35 for plasma p-tau181, all p<0.001) and amyloid PET global SUVR (range: 0.48 for plasma p-tau181 to 0.78 for PET entorhinal cortex, all p<0.001). Furthermore, tau biomarkers were negatively correlated with CSF Aβ42/40 ratio (range: -0.45 for plasma p-tau181 to -0.66 for CSF p-tau181, all p<0.001), cognitive tests scores (e.g., MMSE, range: -0.36 for plasma p-tau181 to -0.75 for PET temporal meta-ROI, all p<0.001) and MRI measures (e.g., AD-signature cortical thickness, range: -0.39 for plasma p-tau181 to -0.62 for PET entorhinal cortex, all p<0.001 Figure 1b). In general, the correlation coefficients for AD-related features were slightly lower for plasma p-tau181. Furthermore, p-tau217 in both plasma and CSF showed a higher correlation with tau PET than p-tau181 in plasma or CSF. Similar associations were observed for the available variables in ADNI (Figure 1c).
Concordance of PET, CSF and plasma tau biomarkers
Next, we examined the concordance between PET, CSF and plasma tau biomarkers in the BioFINDER-2 cohort. The concordance between tau PET standardized uptake value ratios (SUVR) in the temporal meta-ROI and CSF p-tau181 was 83% (Figure 2). Of the 17% discordant participants, 16% showed isolated tau positivity on CSF p-tau181 (CSF+), while only 1% were positive for tau PET (PET+) and negative for CSF p-tau181. Tau PET was concordant with plasma p-tau181 in 80% (5% plasma+/PET-, 15% PET+/plasma-), with plasma p-tau217 in 86% (12% plasma+/PET-, 2% PET+/plasma-), and with CSF p-tau217 in 80% of cases (19% CSF+/PET-, 1% PET+/CSF, Figure 2).
The concordance between fluid tau biomarkers ranged between 66% (CSF p-tau217 vs plasma p-tau181), 70% (CSF p-tau181 vs plasma p-tau181), 73% (plasma p-tau181 vs plasma p-tau217), 82% (CSF p-tau181 vs plasma p-tau217), 83% (CSF p-tau217 vs plasma p-tau217) and 95% (CSF p-tau181 vs CSF p-tau217, Supplementary figure 1). Tau PET SUVR in the entorhinal cortex showed a concordance of 87% with CSF p-tau217 (12% CSF+/PET-, 1% PET+/CSF-) and of 84% with plasma p-tau217 (9% plasma+/PET-, 6% PET+/plasma-), Supplementary figure 1). Overall, in terms of biomarker discordance, a biofluid+/PET-profile was more common than a biofluid-/PET+ profile, with the exception of plasma p-tau181.
Partly differential associations between tau PET and CSF p-tau181 vs AD-related features
Based on three sets of ridge regression models (model 1: CSF p-tau181, model 2: tau PET SUVR in the temporal meta-ROI, model 3: CSF and PET combined) for each AD-related feature, we examined the possible differential associations for either tau PET or CSF p-tau181 to other AD-related features (Figure 3a). Analyses across the whole group indicated that CSF p-tau181 was independently from tau PET associated to risk factors for AD (i.e., age and APOE ε4 carriership) and Aβ pathology, whereas tau PET was more strongly associated with indicators of disease progression including lower cognitive test scores and reduced cortical thickness. When stratifying for cognitive status (i.e., CU vs MCI/dementia), this pattern was similar for CSF in CU and for PET in the symptomatic stages. Additionally, CSF was more strongly associated with MMSE and executive functioning composite score in CU individuals. These patterns of results were consistent when investigating percentual change of β-coefficients (Supplementary table 2) and when comparing the R-squared values between the simple models for PET and CSF (Supplementary table 3). Replication of the analyses in ADNI revealed overall similar results, except that the stronger association of CSF with cognitive measures in CU individuals observed in BioFINDER-2 was not present in ADNI (Figure 3b).
Relative importance of AD features in predicting CSF p-tau181 and tau PET levels
Next, we explored the association between CSF p-tau181 and tau PET SUVR in a temporal meta-ROI with AD-related features using regression tree models in both BioFINDER-2 (Figure 4a) and in ADNI (Figure 4b). The advantage of regression tree models is that all variables are modelled together, resulting in an estimation of how important each AD-related feature is relative to the other features for PET and CSF separately. We found that amyloid PET retention and the CSF Aβ42/40 ratio were among the most important predictors of tau biomarker levels for most models, but they showed tau biomarker modality specific effects. For example, the CSF Aβ42/40 ratio was an important predictor of CSF p-tau181 levels in both CU (median VIM [95% confidence intervals]; BioFINDER-2: 1.23 [1.18-1.32], rank #2; ADNI: 1.35 [1.25-1.51], rank #1) and MCI/dementia (BioFINDER-2: 1.43 [1.32-1.59], rank #1; ADNI: 1.21 [1.10, 1.39], rank #1) groups, while it was a more important predictor of tau PET in the CU group (BioFINDER-2: 0.67 [0.57-0.80], rank #3; ADNI: 0.91 [0.75-1.05], rank #1), but to a lesser extent in MCI/dementia (BioFINDER-2: 0.86 [0.72-1.06], rank #9; ADNI: 0.75 [0.67-0.83], rank #4). In CU, age was an important predictor for both CSF p-tau181 and tau PET (ranks varying from #2 to #4), whereas it was not an important predictor for either tau biomarker in the symptomatic stages (ranks varying from #6 to #9). In the symptomatic stages, memory z-score was the most informative out of cognitive tests for all models, which was more pronounced for tau PET (ranked #2 in both cohorts) than for CSF p-tau181 (ranked #4 in both cohorts). These results are largely congruent with the information obtained using the ridge regression models.
Exploring plasma p-tau markers, p-tau217 epitopes and entorhinal cortex tau PET
Finally, we used the aforementioned ridge regression models to explore associations of the AD-related features with plasma p-tau181, plasma p-tau217 and CSF p-tau217 (all compared to temporal meta-ROI tau PET) and with entorhinal cortex tau PET SUVR (in comparison to CSF p-tau181). When comparing plasma p-tau181 and tau PET in the temporal meta-ROI, plasma p-tau181 only showed a stronger association with age, while tau PET most strongly associated with all cognitive test scores and MRI measures (Figure 5a). Compared to tau PET, plasma p-tau217 was more strongly associated with APOE ε4 carriership, amyloid PET and the CSF Aβ42/40 ratio, while tau PET was more strongly associated with cognitive decline and MRI-based atrophy compared to plasma p-tau217 (Figure 5b). Replacing CSF p-tau181 with CSF p-tau217 yielded essentially the same results as in our main analysis (Figure 5c), although it should be noted that the R-squared values from the simple models were slightly but consistently higher for CSF p-tau217 compared to CSF p-tau181 (Supplementary table 4), with the exception of age. We additionally compared CSF p-tau217 to tau PET in the entorhinal cortex (Supplementary figure 2). Contrary to analyses including the temporal meta-ROI, CSF p-tau217 was no longer independently associated with age and APOE ε4 carriership, and the stronger associations between tau PET and cognitive decline in the symptomatic stage were no longer found.
DISCUSSION
In this study, we aimed to investigate whether PET, CSF and plasma biomarkers of tau pathology in AD are comparable to each other or carry unique information about AD-related demographic, cognitive, genetic and neuroimaging markers. First, we showed that the concordance ranged between 66% (CSF p-tau217 vs plasma p-tau181) and 95% (CSF p-tau181 vs CSF p-tau217) across all tau biomarkers, and between 80% (tau PET vs plasma p-tau181/CSF p-tau217) and 86% (tau PET vs plasma p-tau217) for biofluid-vs neuroimaging-based tau biomarkers. Ridge regression models showed that increased CSF and plasma p-tau181 and p-tau217 levels were independently associated with aging, and APOE ε4 and Aβ positivity, while increased temporal meta-ROI tau PET retention was more strongly associated with worse cognitive performance and reduced cortical thickness. The majority of results were consistent between the discovery cohort (i.e., BioFINDER-2) and the replication cohort (i.e., ADNI). The data suggest that biofluid tau biomarkers are more tightly linked with early markers of AD (especially Aβ pathology), while tau PET showed strongest associations with cognitive and neurodegenerative markers of disease progression. Overall, the results support our hypothesis that the three tau biomarker modalities provide partially independent information.
The concordance between tau PET vs p-tau181 and p-tau217 in CSF and in plasma ranged from 80% to 86%. An optimistic interpretation of this level of agreement would be that CSF and especially plasma biomarkers offer cheaper and more scalable alternatives compared to tau PET when the objective is to obtain evidence of the presence or absence of pathological levels of hyperphosphorylated tau. On the other hand, there is also a substantial mismatch of up to 20% between the neuroimaging vs biofluid markers that can have important ramifications for their application in clinical, investigational and clinical trial settings. One can draw a parallel with studies comparing amyloid PET vs CSF Aβ levels that consistently observed discordance rates of ∼10-20%.35-38 This biomarker discordance was demonstrated to be impactful. For example, persons with abnormal CSF Aβ levels but a normal amyloid PET scan were more likely to accumulate more Aβ pathology over time and to show faster clinical progression than persons with normal CSF Aβ levels but an abnormal amyloid PET.26,35,39,40 Moreover, studies have shown that CSF Aβ42 may yield false positive results in certain neurological conditions evoking a neuroinflammatory response41-43, although this can partially be accounted for by using an Aβ42/40 or Aβ42/p-tau ratio. The intended use of biomarkers is thus highly context dependent, and multiple factors like patient characteristics, goal of the biomarker assessment, and availability of resources and expertise may weigh in. Although the results of this study are not conclusive, they are in line with previous work highlighting that tau PET might be most useful for the differential diagnosis of dementia (thus late-stage disease) and for tracking disease progression44-49, while CSF and plasma tau biomarkers are more sensitive markers that can used to detect AD in its earliest stages.25,27-29,31 Altogether, these findings challenge the notion that the different tau biomarkers can be used interchangeably.50
The independent information provided by PET, CSF and plasma biomarkers may be explained by some inherent biological differences. Autopsy studies have shown that tau PET (at least with the tracer [18F]flortaucipir) is not very sensitive and generally reveals neurofibrillary tangle pathology in Braak stage 4 or higher.34,51 On the other hand, CSF and plasma p-tau mirror concurrent abnormalities in tau metabolism such as increased phosphorylation and release of soluble tau from damaged neurons.4,52 Soluble p-tau levels in CSF and plasma are thus state markers reflecting the balance between production and clearance of tau at time of lumbar puncture or blood draw, while the insoluble tau aggregates measured with PET are likely the product of processes that have occurred over the entire disease duration, making tau PET a stage marker. The detection of tau pathology in a relatively late stage and in a more mature (insoluble) conformation with PET is in line with its strong cognitive and neurodegenerative correlates (i.e., markers of disease progression), while the detection of early abnormalities in tau metabolism with CSF and plasma is consistent with their strong associations with early indicators of AD like aging and APOE ε4 and Aβ positivity. In addition to differences between modalities, there were also within-modality differences when using p-tau181 or p-tau217. In line with previous studies13,17, p-tau217 showed subtly stronger associations with tau PET measures and other AD-features than p-tau181, which could in turn be explained by stronger relationships with the quantity of neurofibrillary tangle pathology and neuropil threads for antibodies recognizing p-tau217 vs p-tau181.53
Strengths and limitations
Strengths of the study include the large and comprehensive dataset and the inclusion of a replication cohort. There are also some limitations. First, plasma p-tau181 and p-tau217 were not available in ADNI at the time of tau PET (that was performed six years later30) and CSF p-tau217 was not determined. Therefore, we could only replicate the tau PET vs CSF p-tau181 analysis in ADNI. Moreover, we used different tau PET tracers and CSF assays between BioFINDER and ADNI. Second, the sample size of symptomatic patients was insufficient to stratify by MCI and AD dementia and these groups were therefore pooled. Future studies with larger sample sizes should test whether results differ between MCI and AD dementia.
Future directions
In addition to investigational and research settings, biomarkers have become an integrated part of clinical trials. For example, CSF p-tau and tau PET have served as a secondary outcome measures in clinical trials testing the efficacy of disease modifying treatments targeting the Aβ pathway.54-56 Until recently, (pre-)screening and/or selection of clinical trial participants was only done using Aβ PET and/or CSF biomarkers.57 A recent successful phase II clinical trial with the Aβ antibody donanemab, however, took an innovative approach by selecting Aβ-positive individuals MCI/mild dementia with intermediate levels of tau pathology based on a PET scan.58 Furthermore, an underpowered exploratory analysis suggested that clinical benefit may be associated with the lower tau PET SUVR range. This clinical trial served as the first example for tau PET biomarkers as a selection tool for trial participants. Future work is needed to establish whether cheaper and more scalable plasma and/or CSF tau biomarkers are suitable alternatives to tau PET. A key question is whether biofluid markers show a greater dynamic range at earlier pathological stages, while PET continues to increase in the advanced disease stages (i.e., plateaus at a later stage of the disease). As clinical trial design continues to evolve, it is important to consider the use of biomarkers in those trials and how those markers may or may not be useful in primary care settings to aid in management of patients through helping inform on when to start or stop treatment.
MATERIALS AND METHODS
Participants
We included a total of 771 participants from the Swedish BioFINDER-2 study at Lund University (discovery cohort, n=400) and the Alzheimer’s disease neuroimaging initiative (ADNI, replication cohort, n=371), including 461 cognitively unimpaired (CU) individuals (BioFINDER-2: 219, ADNI: 242) and 310 individuals diagnosed with mild cognitive impairment (MCI) or AD dementia according to NIA-AA diagnostic criteria59,60 (BioFINDER-2: 181, ADNI: 129). All participants had tau PET and CSF data available, while plasma p-tau biomarkers (at time of tau PET and lumbar puncture) were only available for the Swedish BioFINDER-2 participants. In addition, all participants underwent a medical history and neurological examination, MRI, APOE genotyping and a neuropsychological test battery that included the Mini-Mental State Examination (MMSE) and domain specific tests for memory, executive functioning, language and visuospatial abilities.61-63 Written informed consent was obtained from all participants and local institutional review boards for human research approved the study. The study was performed in accordance with the ethical standards as laid down in the 1964 Declaration of Helsinki and its later amendments.
MRI data
In BioFINDER-2, a high-resolution T1-weighted MRI was acquired (3T MAGNETOM Prisma; Siemens Healthineers), while multiple 1.5T and 3T MRI scanners were used in the multi-center ADNI study.64 MRI data were processed using previously reported procedures.44,45,63,65,66 Briefly, cortical reconstruction and volumetric segmentation were performed with the FreeSurfer (v6.0) image analysis pipelines (http://surfer.nmr.mgh.harvard.edu/). The MP-RAGE images underwent correction for intensity homogeneity67, removal of non-brain tissue68, and segmentation into grey matter (GM) and white matter (WM) with intensity gradient and connectivity among voxels69. Cortical thickness was measured as the distance from the GM/WM boundary to the corresponding pial surface70. Reconstructed data sets were visually inspected for accuracy, and segmentation errors were corrected. We computed hippocampal volumes (adjusted for total intracranial volume) and AD-signature cortical thickness comprising bilateral entorhinal, inferior and middle temporal and fusiform cortex.71
Amyloid PET and CSF
In the BioFINDER-2 study, amyloid PET was performed using [18F]flutemetamol on a digital Discovery MI scanner (GE Healthcare). SUVR images were created for the 90 to 110 minutes post-injection interval using the pons as reference region. In ADNI, amyloid PET was performed using [18F]florbetapir (n=221, 50-70 minutes post-injection, whole cerebellum reference region) or [18F]florbetaben (n=150, 90-110, minutes post-injection, whole cerebellum reference region) on multiple PET scanners. SUVR values were re-scaled onto the Centiloid scale (for [18F]florbetapir: [196.9 * SUVR] – 196.03, for [18F]florbetaben: [159.08 * SUVR] – 151.65)72 to enable pooled analysis. For BioFINDER-2 and ADNI, the CSF Aβ42/40 ratio was determined using the MSD platform (Meso Scale Discovery) and Elecsys immunoassays (Roche Diagnostics, Basel), respectively.
Tau PET
PET images were processed using previously reported procedures.45,65,66,73 In the BioFINDER-2 study, tau PET was performed using [18F]RO948 on a digital Discovery MI scanner (GE Healthcare). Standardized uptake value ratio (SUVR) images were created for the 70 to 90 minutes post-injection interval using the inferior cerebellar cortex as the reference region. In ADNI, tau PET was performed using [18F]flortaucipir and SUVR images were created for the 80-100 post-injection interval using inferior cerebellar cortex as the reference region using a previously published approach.73 In line with previous work from our group and others44,45,65,74,75, we used a temporal meta-ROI71 comprising a weighted average of entorhinal, amygdala, parahippocampal, fusiform and inferior and middle temporal ROIs for the primary analysis. For the concordance analysis with CSF and plasma p-tau biomarkers, we binarized temporal meta-ROI tau PET retention using previously established cut-offs of 1.36 ([18F]RO948) and 1.34 ([18F]flortaucipir) SUVR based on mean + (2 x standard deviation) uptake in elderly cognitively normal individuals and mean + (2 x standard deviation) uptake in young cognitively normal individuals, respectively.65 Because previous studies suggested that CSF p-tau and plasma p-tau may become abnormal prior to tau PET, we performed a sensitivity analysis using entorhinal cortex SUVR76,77 (a brain region affected early in AD78), using previously established cut-offs of 1.48 ([18F]RO948) and 1.39 ([18F]flortaucipir) SUVR.65
CSF p-tau biomarkers
CSF samples were derived from lumbar puncture performed within 12 months from the tau PET scan. The procedures and analysis of CSF followed the Alzheimer’s Association Flow Chart for CSF biomarkers79 and were performed by technicians blinded to the clinical and imaging data. In BioFINDER-2, analysis of CSF p-tau181 and p-tau217 was performed at Eli Lilly and Company using the MSD platform.13 In ADNI, CSF p-tau181 was quantified using Elecsys immunoassays (Roche, Basel, Switzerland), while CSF p-tau217 was not available.80 For concordance analyses (in BioFINDER-2 only), we used a previously established cut-off for CSF p-tau217 of 101.95 pg/mL, based on the mean + (2 x standard deviation) in a group of 224 Aβ-negative cognitively normal individuals.16 Because there was no predefined cut-off for CSF p-tau181, we established a cut-off at 69.46 pg/ml based on the mean + (2 x standard deviation) in 200 Aβ-negative cognitively normal individuals from BioFINDER-2 (of whom 111 overlapped with the current sample). Note that cut-offs were only used for the concordance analyses presented in Figure 2 and Supplementary figure 1, with continuous CSF (and plasma) values used in all other statistical models.
Plasma p-tau biomarkers
Plasma biomarkers were measured as described previously.16 Plasma p-tau181 was quantified using an in-house Simoa-based immunoassay at the Clinical Neurochemistry Laboratory in Gothenburg.14 Analysis of plasma p-tau217 was performed at Eli Lilly and Company using the MSD platform.12,15 For both plasma p-tau181 and p-tau217 one outlier was removed. Out of 399 study participants, 110 had plasma p-tau217 levels below the detection limit of the assay. When plasma p-tau217 concentrations could not be interpolated from the standard curve due to very low signal, values were imputed to the lowest measurable value. Out of 110 samples below the detection limit, plasma p-tau217 values were imputed for 41 cases (10.3% of the total sample). Note that 92.7% (38/41) of imputed data and 92.7% (102/110) of samples below the detection limit were present in the Aβ-negative group. Therefore, these values were considered to represent truly very low p-tau217 concentrations and were included in all statistical analysis. Cutoffs for concordance analyses were previously established at 11.9 pg/mL for plasma p-tau181 and at 2.5 pg/mL for plasma p-tau217, based on the mean + (2 x standard deviation) in group of 224 Aβ-negative cognitively normal individuals.16
Statistical analyses
Statistical analysis was performed using R software (Version 4.0.3). When presenting group characteristics, patient features were compared using two samples t-tests and Chi-squared tests. Non-adjusted Pearson correlation coefficients were calculated using the corrplot package. We accounted for missing values using multiple imputations using the mice package (25 imputations and 5 iterations), as both of the methods described below needed all values to be present. An overview of the proportion of missing values is presented in Supplementary table 1.
First, we examined the correlations between the different tau biomarkers and AD-related features, as well as the degree of concordance between the PET, CSF and plasma tau biomarkers.
Second, we tested whether CSF p-tau181 and tau PET in the temporal meta-ROI were differentially associated with other AD-related features. As those features, we selected age, APOE ε4 carriership, amyloid biomarkers (CSF Aβ42/40 ratio, amyloid PET global SUVR/Centiloids), cognitive measures (MMSE and composite z-scores for memory, language, executive functioning and visuospatial domains61-63), and structural MRI measures (hippocampal volumes [adjusted for intracranial volume] and AD-signature cortical thickness). In line with comparable work on amyloid biomarkers81, we first created three sets of regularized regression models using ridge regression: (i) AD-related feature predicted by CSF p-tau181 (simple model), (ii) AD-related feature predicted by PET temporal meta-ROI (simple model), (iii) AD-related feature predicted by both CSF p-tau181 and PET temporal meta-ROI (combined model). All models were adjusted for age and sex, and models predicting cognitive performance were additionally adjusted for education. We chose to use ridge regression because it provides stable estimates of β-coefficients despite correlated predictors82, which is the case in our combined models. From this set of analyses, we computed four 95% confidence intervals (CI) of β-coefficients for each AD-related feature (i.e., for PET from the simple model, for CSF from the simple model, and for both PET and CSF from the combined model) by using bootstrapped sampling with replacement (N=1,000 iterations). We used these 95% CIs to compare the β-coefficients of models for PET and CSF. Note that amyloid PET was not performed in cases with dementia in the BioFINDER-2 study. Hence, amyloid PET SUVR values were not imputed (because it would introduce systematic bias), and the bootstrapped samples were taken only from cases with available amyloid PET. To compare the strength of the associations between PET and CSF tau biomarkers with the predicted AD-features, we followed these three criteria: (i) non-overlapping 95% CIs of the β-coefficient of the simple models for CSF and PET (i.e., stronger association for the biomarker with the more positive or negative value), (ii) 95% CIs in the simple or combined models non-overlapping with β=0 for only CSF or PET (stronger association for the tau biomarker non-overlapping with β=0, (iii) a significant drop of the β-coefficient from the combined model relative to the simple model for only CSF or PET (i.e., overlapping 95% CIs for one tau biomarker between the simple and combined model, but non-overlapping 95% CIs for the other, with a stronger association for the biomarker with overlapping 95% CIs). In case a feature was not significantly associated with both tau biomarkers, we did not perform the combined model. We also investigated whether the results were similar when comparing the change in percentage of β-coefficients from the simple to the combined model, and when comparing the R-squared values between the simple models of CSF and PET. After the primary analysis in BioFINDER-2, we aimed to replicate the findings using the ADNI dataset.
Third, to identify the AD-features that were most strongly associated with the tau biomarkers, we created parallel regression tree models (predicting CSF p-tau181 levels and tau PET SUVR in the temporal meta-ROI) with continuous AD-related patient features using the caret package. These regression trees provide an estimate of relative strength of the association between AD-related patient features and tau biomarkers, while adjusting for all other variables in the model.83 Regression tree models are based on binary recursive partitioning in which each fork is a split of a predictor variable and each node at the end has a prediction for the continuous outcome variable. The splits are based on minimizing the overall sums of squares error and are pruned down to reduce over-fitting. We used bootstrap aggregation (i.e., bagging) with N=25 bootstrap replications in which final predictions are based on the average of the replications. Model accuracy is tested using 10-fold cross-validation. We used the variable importance measure (VIM) from the models to estimate the relative importance of variables to predict tau biomarkers. The VIM for a variable is based on the average decrease of root mean squared error when it is used in the model, and higher VIM indicates that the variable is considered more important to predict the outcome. In our analysis, we present the VIMs from N=25 bagged regression tree models, created with each of the 25 imputed datasets.
Fourth, we aimed to explore p-tau181 in plasma, a different p-tau isoform (i.e., p-tau217) in plasma and CSF, and an earlier affected tau PET region (i.e., entorhinal cortex) in the BioFINDER-2 cohort only. Therefore, we conducted ridge regression models (as described above) to investigate the potentially different associations with AD-features using different pairings of tau biomarkers, i.e., (i) tau PET SUVR in the temporal meta-ROI vs plasma p-tau181 levels, (ii) tau PET SUVR in the temporal meta-ROI vs plasma and CSF p-tau217 levels, and (iii) tau PET SUVR in the entorhinal cortex vs CSF p-tau181.
Funding
This project has received funding from the European Research Council (949570), the Swedish Research Council (2016-00906), the Knut and Alice Wallenberg foundation (2017-0383), the Marianne and Marcus Wallenberg foundation (2015.0125), the Strategic Research Area MultiPark (Multidisciplinary Research in Parkinson’s disease) at Lund University, the Swedish Alzheimer Foundation (AF-939932), the Swedish Brain Foundation (FO2019-0326), The Parkinson foundation of Sweden (1280/20), the Skåne University Hospital Foundation (2020-O000028), Regionalt Forskningsstöd (2020-0314) and the Swedish federal government under the ALF agreement (2018-Projekt0279). The precursor of 18F-flutemetamol was provided by GE Healthcare in BioFINDER-2 and the precursor of 18F-RO948 was provided by Roche in BioFINDER-2. HZ is a Wallenberg Scholar. KB is supported by the Swedish Research Council (#2017-00915), the Swedish Alzheimer Foundation (#AF-742881), Hjärnfonden, Sweden (#FO2017-0243), and the Swedish state under the agreement between the Swedish government and the County Councils, the ALF-agreement (#ALFGBG-715986).
Data collection and sharing for this project was funded by the Alzheimer’s Disease Neuroimaging Initiative (ADNI) (National Institutes of Health Grant U01 AG024904) and DOD ADNI (Department of Defense award number W81XWH-12-2-0012). ADNI is funded by the National Institute on Aging, the National Institute of Biomedical Imaging and Bioengineering, and through generous contributions from the following: AbbVie, Alzheimer’s Association; Alzheimer’s Drug Discovery Foundation; Araclon Biotech; BioClinica, Inc.; Biogen; Bristol-Myers Squibb Company; CereSpir, Inc.; Cogstate; Eisai Inc.; Elan Pharmaceuticals, Inc.; Eli Lilly and Company; EuroImmun; F. Hoffmann-La Roche Ltd and its affiliated company Genentech, Inc.; Fujirebio; GE Healthcare; IXICO Ltd.; Janssen Alzheimer Immunotherapy Research & Development, LLC.; Johnson & Johnson Pharmaceutical Research & Development LLC.; Lumosity; Lundbeck; Merck & Co., Inc.; Meso Scale Diagnostics, LLC.; NeuroRx Research; Neurotrack Technologies; Novartis Pharmaceuticals Corporation; Pfizer Inc.; Piramal Imaging; Servier; Takeda Pharmaceutical Company; and Transition Therapeutics. The Canadian Institutes of Health Research is providing funds to support ADNI clinical sites in Canada. Private sector contributions are facilitated by the Foundation for the National Institutes of Health (www.fnih.org). The grantee organization is the Northern California Institute for Research and Education, and the study is coordinated by the Alzheimer’s Therapeutic Research Institute at the University of Southern California. ADNI data are disseminated by the Laboratory for Neuro Imaging at the University of Southern California.
Conflicts of interest/Competing interests
HZ has served at scientific advisory boards for Eisai, Denali, Roche Diagnostics, Wave, Samumed, Siemens Healthineers, Pinteon Therapeutics, Nervgen, AZTherapies and CogRx, has given lectures in symposia sponsored by Cellectricon, Fujirebio, Alzecure and Biogen, and is a co-founder of Brain Biomarker Solutions in Gothenburg AB (BBS), which is a part of the GU Ventures Incubator Program. KB has served as a consultant, at advisory boards, or at data monitoring committees for Abcam, Axon, Biogen, JOMDD/Shimadzu. Julius Clinical, Lilly, MagQu, Novartis, Roche Diagnostics, and Siemens Healthineers, and is a co-founder of Brain Biomarker Solutions in Gothenburg AB (BBS), which is a part of the GU Ventures Incubator Program. SP has served at scientific advisory boards for Roche and Geras Solutions. JLD is an employee and shareholder of Eli Lilly and Company. OH has acquired research support (for the institution) from AVID Radiopharmaceuticals, Biogen, Eli Lilly, Eisai, GE Healthcare, Pfizer, and Roche. In the past 2 years, he has received consultancy/speaker fees from AC Immune, Alzpath, Biogen, Cerveau and Roche.
The other authors report no conflicts of interest
SUPPLEMENTARY MATERIAL
Footnotes
↵# Data used in preparation of this article were obtained from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database (adni.loni.usc.edu). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and/or provided data but did not participate in analysis or writing of this report. A complete listing of ADNI investigators can be found at: http://adni.loni.usc.edu/wp-content/uploads/how_to_apply/ADNI_Acknowledgement_List.pdf
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