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Electrocorticography is superior to subthalamic local field potentials for movement decoding in Parkinson’s disease

View ORCID ProfileTimon Merk, Victoria Peterson, Witold Lipski, Benjamin Blankertz, View ORCID ProfileRobert S. Turner, View ORCID ProfileNingfei Li, View ORCID ProfileAndreas Horn, Andrea A. Kühn, View ORCID ProfileR. Mark Richardson, View ORCID ProfileWolf-Julian Neumann
doi: https://doi.org/10.1101/2021.04.24.441207
Timon Merk
1Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Berlin, 10117, Germany
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  • ORCID record for Timon Merk
Victoria Peterson
2Brain Modulation Lab, Department of Neurosurgery, Massachusetts General Hospital, Boston, Massachusetts, 02114, USA
5Harvard Medical School, Boston, Massachusetts, 02114, USA
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Witold Lipski
3Department of Neurobiology, University of Pittsburgh, Pittsburgh, Pennsylvania, 15213, USA
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Benjamin Blankertz
4Department of Computer Science, Technische Universität Berlin, Berlin, Berlin, 10587, Germany
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Robert S. Turner
3Department of Neurobiology, University of Pittsburgh, Pittsburgh, Pennsylvania, 15213, USA
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Ningfei Li
1Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Berlin, 10117, Germany
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Andreas Horn
1Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Berlin, 10117, Germany
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Andrea A. Kühn
1Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Berlin, 10117, Germany
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R. Mark Richardson
2Brain Modulation Lab, Department of Neurosurgery, Massachusetts General Hospital, Boston, Massachusetts, 02114, USA
5Harvard Medical School, Boston, Massachusetts, 02114, USA
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Wolf-Julian Neumann
1Movement Disorder and Neuromodulation Unit, Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Berlin, 10117, Germany
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  • For correspondence: julian.neumann@charite.de
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Summary

Smart brain implants will revolutionize neurotechnology for improving the quality of life in patients with brain disorders. The treatment of Parkinson’s disease (PD) with neural implants for deep brain stimulation (DBS) presents an avenue for developing machine-learning based individualized treatments to refine human motor control. We developed an optimized movement decoding approach to predict grip-force based on sensorimotor electrocorticography (ECoG) and subthalamic local field potentials in PD patients undergoing DBS neurosurgery. ECoG combined with Bayesian optimized extreme gradient boosted decision trees outperformed multiple state of the art machine learning approaches. We further developed a whole brain connectomics approach to predict decoding performance in invasive neurophysiology, relevant for connectomic targeting of distributed brain networks for neural decoding. PD motor impairment deteriorated decoding performance, suggestive of a role for dopamine in human movement coding capacity. Our study provides an advanced neurophysiological and computational framework to aid development of intelligent adaptive DBS.

  • Parkinson’s disease
  • Deep brain stimulation
  • Machine learning
  • Neuromodulation
  • XGBOOST
  • Basal ganglia
  • Electrocorticography
  • Local field potentials
  • Oscillations

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Timon Merk: timon.merk{at}charite.de

  • Victoria Peterson: vpeterson2{at}mgh.harvard.edu

  • Witold Lipski: lipskiw{at}upmc.edu

  • Benjamin Blankertz: benjamin.blankertz{at}tu-berlin.de

  • Robert Sterling Turner: rturner{at}pitt.edu

  • Ningfei Li: Ningfei.li{at}charite.de

  • Andreas Horn: andreas.horn{at}charite.de

  • Andrea Kühn: andrea.kuehn{at}charite.de

  • Robert Mark Richardson: Mark.Richardson{at}mgh.harvard.edu

  • Wolf-Julian Neumann: julian.neumann{at}charite.de

  • Figure 4 Adapted Label; Figure 5 Label sample wise correlation label adapted

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted May 06, 2021.
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Electrocorticography is superior to subthalamic local field potentials for movement decoding in Parkinson’s disease
Timon Merk, Victoria Peterson, Witold Lipski, Benjamin Blankertz, Robert S. Turner, Ningfei Li, Andreas Horn, Andrea A. Kühn, R. Mark Richardson, Wolf-Julian Neumann
bioRxiv 2021.04.24.441207; doi: https://doi.org/10.1101/2021.04.24.441207
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Electrocorticography is superior to subthalamic local field potentials for movement decoding in Parkinson’s disease
Timon Merk, Victoria Peterson, Witold Lipski, Benjamin Blankertz, Robert S. Turner, Ningfei Li, Andreas Horn, Andrea A. Kühn, R. Mark Richardson, Wolf-Julian Neumann
bioRxiv 2021.04.24.441207; doi: https://doi.org/10.1101/2021.04.24.441207

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