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Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model
Mathias Hammer, View ORCID ProfileMaximiliaan Huisman, Alex Rigano, View ORCID ProfileUlrike Boehm, View ORCID ProfileJames J. Chambers, View ORCID ProfileNathalie Gaudreault, View ORCID ProfileAlison J. North, View ORCID ProfileJaime A. Pimentel, View ORCID ProfileDamir Sudar, View ORCID ProfilePeter Bajcsy, View ORCID ProfileClaire M. Brown, View ORCID ProfileAlexander D. Corbett, View ORCID ProfileOrestis Faklaris, Judith Lacoste, View ORCID ProfileAlex Laude, View ORCID ProfileGlyn Nelson, View ORCID ProfileRoland Nitschke, Farzin Farzam, View ORCID ProfileCarlas S. Smith, David Grunwald, View ORCID ProfileCaterina Strambio-De-Castillia
doi: https://doi.org/10.1101/2021.04.25.441198
Mathias Hammer
1RNA Therapeutics Institute, UMass Medical School, Worcester MA 01605, USA
Maximiliaan Huisman
1RNA Therapeutics Institute, UMass Medical School, Worcester MA 01605, USA
Alex Rigano
2Program in Molecular Medicine, UMass Medical School, Worcester MA 01605, USA
Ulrike Boehm
3Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
James J. Chambers
4Institute for Applied Life Sciences, University of Massachusetts, Amherst, MA 01003, USA
Nathalie Gaudreault
5Allen Institute for Cell Science, Seattle, WA 98109, USA
Alison J. North
6The Rockefeller University, New York, NY 10065, USA
Jaime A. Pimentel
7Instituto de Biotecnologıa, Universidad Nacional Autonoma de Mexico, Cuernavaca, Morelos, 62210, México
Damir Sudar
8Quantitative Imaging Systems LLC, Portland, OR 97209, USA
Peter Bajcsy
9National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
Claire M. Brown
10Advanced BioImaging Facility (ABIF), McGill University, Montreal, Quebec, H3G 0B1, Canada
Alexander D. Corbett
11Department of Physics and Astronomy, University of Exeter, Exeter, EX4 4QL, UK
Orestis Faklaris
12BCM, Univ. Montpellier, CNRS, INSERM, Montpellier, France
Judith Lacoste
13MIA Cellavie Inc., Montreal, Quebec, H1K 4G6, Canada
Alex Laude
13MIA Cellavie Inc., Montreal, Quebec, H1K 4G6, Canada
Glyn Nelson
14Bioimaging Unit, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK
Roland Nitschke
15Life Imaging Center and BIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University Freiburg, Freiburg, 79104, Germany
Farzin Farzam
1RNA Therapeutics Institute, UMass Medical School, Worcester MA 01605, USA
Carlas S. Smith
16Delft Center for Systems and Control & Department of Imaging Physics, Delft University of Technology, Delft, 2628 CN, The Netherlands
David Grunwald
1RNA Therapeutics Institute, UMass Medical School, Worcester MA 01605, USA
Caterina Strambio-De-Castillia
2Program in Molecular Medicine, UMass Medical School, Worcester MA 01605, USA

- Supplemental Material[supplements/441198_file04.pdf]
Posted April 26, 2021.
Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model
Mathias Hammer, Maximiliaan Huisman, Alex Rigano, Ulrike Boehm, James J. Chambers, Nathalie Gaudreault, Alison J. North, Jaime A. Pimentel, Damir Sudar, Peter Bajcsy, Claire M. Brown, Alexander D. Corbett, Orestis Faklaris, Judith Lacoste, Alex Laude, Glyn Nelson, Roland Nitschke, Farzin Farzam, Carlas S. Smith, David Grunwald, Caterina Strambio-De-Castillia
bioRxiv 2021.04.25.441198; doi: https://doi.org/10.1101/2021.04.25.441198
Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model
Mathias Hammer, Maximiliaan Huisman, Alex Rigano, Ulrike Boehm, James J. Chambers, Nathalie Gaudreault, Alison J. North, Jaime A. Pimentel, Damir Sudar, Peter Bajcsy, Claire M. Brown, Alexander D. Corbett, Orestis Faklaris, Judith Lacoste, Alex Laude, Glyn Nelson, Roland Nitschke, Farzin Farzam, Carlas S. Smith, David Grunwald, Caterina Strambio-De-Castillia
bioRxiv 2021.04.25.441198; doi: https://doi.org/10.1101/2021.04.25.441198
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