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Increased biosynthesis of acetyl-CoA in the yeast Saccharomyces cerevisiae by overexpression of a deregulated pantothenate kinase gene

Judith Olzhausen, Mathias Grigat, Larissa Seifert, Tom Ulbricht, View ORCID ProfileHans-Joachim Schüller
doi: https://doi.org/10.1101/2021.05.25.445608
Judith Olzhausen
Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Universität Greifswald, Felix-Hausdorff-Strasse 8, D-17487 Greifswald, Germany
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Mathias Grigat
Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Universität Greifswald, Felix-Hausdorff-Strasse 8, D-17487 Greifswald, Germany
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Larissa Seifert
Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Universität Greifswald, Felix-Hausdorff-Strasse 8, D-17487 Greifswald, Germany
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Tom Ulbricht
Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Universität Greifswald, Felix-Hausdorff-Strasse 8, D-17487 Greifswald, Germany
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Hans-Joachim Schüller
Center for Functional Genomics of Microbes, Abteilung Molekulare Genetik und Infektionsbiologie, Universität Greifswald, Felix-Hausdorff-Strasse 8, D-17487 Greifswald, Germany
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  • ORCID record for Hans-Joachim Schüller
  • For correspondence: schuell@uni-greifswald.de
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Abstract

Coenzyme A (CoA) and its derivatives such as acetyl-CoA are essential metabolites for several biosynthetic reactions. In the yeast S. cerevisiae, five enzymes (encoded by essential genes CAB1-CAB5; coenzyme A biosynthesis) are required to perform CoA biosynthesis from pantothenate, cysteine and ATP. Similar to enzymes from other eukaryotes, yeast pantothenate kinase (PanK, encoded by CAB1) turned out to be inhibited by acetyl-CoA. By genetic selection of intragenic suppressors of a temperature-sensitive cab1 mutant combined with rationale mutagenesis of the presumed acetyl-CoA binding site within PanK, we were able to identify the variant CAB1 W331R, encoding a hyperactive PanK completely insensitive to inhibition by acetyl-CoA. Using a versatile gene integration cassette containing the TPI1 promoter, we constructed strains overexpressing CAB1 W331R in combination with additional genes of CoA biosynthesis (CAB2, CAB3, HAL3, CAB4 and CAB5). In these strains, the level of CoA nucleotides was 15-fold increased, compared to a reference strain without additional CAB genes. Overexpression of wild-type CAB1 instead of CAB1 W331R turned out as substantially less effective (4-fold increase of CoA nucleotides). Supplementation of overproducing strains with additional pantothenate could further elevate the level of CoA (2.3-fold). Minor increases were observed after overexpression of FEN2 (encoding a pantothenate permease) and deletion of PCD1 (CoA-specific phosphatase). We conclude that the strategy described in this work may improve the efficiency of biotechnological applications depending on acetyl-CoA.

Key points

  • A gene encoding a hyperactive yeast pantothenate kinase (PanK) was constructed.

  • Overexpression of CoA biosynthetic genes elevated CoA nucleotides 15-fold.

  • Supplementation with pantothenate further increased the level of CoA nucleotides.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted May 26, 2021.
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Increased biosynthesis of acetyl-CoA in the yeast Saccharomyces cerevisiae by overexpression of a deregulated pantothenate kinase gene
Judith Olzhausen, Mathias Grigat, Larissa Seifert, Tom Ulbricht, Hans-Joachim Schüller
bioRxiv 2021.05.25.445608; doi: https://doi.org/10.1101/2021.05.25.445608
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Increased biosynthesis of acetyl-CoA in the yeast Saccharomyces cerevisiae by overexpression of a deregulated pantothenate kinase gene
Judith Olzhausen, Mathias Grigat, Larissa Seifert, Tom Ulbricht, Hans-Joachim Schüller
bioRxiv 2021.05.25.445608; doi: https://doi.org/10.1101/2021.05.25.445608

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