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RSL24D1 sustains steady-state ribosome biogenesis and pluripotency translational programs in embryonic stem cells

View ORCID ProfileSébastien Durand, Marion Bruelle, Fleur Bourdelais, View ORCID ProfileBigitha Bennychen, View ORCID ProfileJuliana Blin-Gonthier, View ORCID ProfileCaroline Isaac, Aurélia Huyghe, Antoine Seyve, Christophe Vanbelle, View ORCID ProfileDavid Meyronet, View ORCID ProfileFrédéric Catez, View ORCID ProfileJean-Jacques Diaz, View ORCID ProfileFabrice Lavial, View ORCID ProfileEmiliano P. Ricci, View ORCID ProfileFrançois Ducray, View ORCID ProfileMathieu Gabut
doi: https://doi.org/10.1101/2021.05.27.443845
Sébastien Durand
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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Marion Bruelle
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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Fleur Bourdelais
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
3Inovarion, 75005 Paris, France
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Bigitha Bennychen
4University of Ottawa, Dept. of Biochemistry, Microbiology and Immunology. National Research Council Canada, Human Health Therapeutics Research Centre, Ottawa, Canada
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Juliana Blin-Gonthier
5Laboratoire de Biologie et de Modélisation de la Cellule, ENS de Lyon, CNRS UMR 5239, Inserm U1293, Lyon, France
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Caroline Isaac
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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Aurélia Huyghe
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
6Cellular reprogramming, stem cells and oncogenesis, Equipe labellisée la Ligue contre le cancer, Labex Dev2Can, CITI Department
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Antoine Seyve
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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Christophe Vanbelle
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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David Meyronet
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
7Institut de Pathologie Est, Hospices Civils de Lyon, 69002 Lyon, France
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Frédéric Catez
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
8Ribosomes, translation and cancer laboratory, CITI Department
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Jean-Jacques Diaz
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
8Ribosomes, translation and cancer laboratory, CITI Department
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Fabrice Lavial
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
6Cellular reprogramming, stem cells and oncogenesis, Equipe labellisée la Ligue contre le cancer, Labex Dev2Can, CITI Department
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Emiliano P. Ricci
5Laboratoire de Biologie et de Modélisation de la Cellule, ENS de Lyon, CNRS UMR 5239, Inserm U1293, Lyon, France
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François Ducray
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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Mathieu Gabut
1Stemness in gliomas laboratory, Cancer Initiation and Tumoral Cell Identity (CITI) Department
2Cancer Research Centre of Lyon (CRCL) INSERM 1052, CNRS 5286, Université Claude Bernard Lyon I, Centre Léon Bérard, 69008 Lyon, France
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  • For correspondence: mathieu.gabut@inserm.fr
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Abstract

Embryonic stem cell (ESC) fate decisions are regulated by a complex molecular circuitry that requires tight and coordinated gene expression regulations at multiple levels from chromatin organization to mRNA processing. Recently, ribosome biogenesis and translation have emerged as key regulatory pathways that efficiently control stem cell homeostasis. However, the molecular mechanisms underlying the regulation of these pathways remain largely unknown to date. Here, we analyzed the expression, in mouse ESCs, of over 300 genes involved in ribosome biogenesis and we identified RSL24D1 as the most differentially expressed between self-renewing and differentiated ESCs. RSL24D1 is highly expressed in multiple mouse pluripotent stem cell models and its expression profile is conserved in human ESCs. RSL24D1 is associated with nuclear pre-ribosomes and is required for the maturation and the synthesis of 60S subunits in mouse ESCs. Interestingly, RSL24D1 depletion significantly impairs global translation, particularly of key pluripotency factors, including POU5F1 and NANOG, as well as components of the polycomb repressive complex 2 (PRC2). Consistently, RSL24D1 is required for mouse ESC self-renewal and proliferation. Taken together, we show that RSL24D1-dependant ribosome biogenesis is required to both sustain the expression of pluripotent transcriptional programs and silence developmental programs, which concertedly dictate ESC homeostasis.

Competing Interest Statement

The authors have declared no competing interest.

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Posted May 29, 2021.
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RSL24D1 sustains steady-state ribosome biogenesis and pluripotency translational programs in embryonic stem cells
Sébastien Durand, Marion Bruelle, Fleur Bourdelais, Bigitha Bennychen, Juliana Blin-Gonthier, Caroline Isaac, Aurélia Huyghe, Antoine Seyve, Christophe Vanbelle, David Meyronet, Frédéric Catez, Jean-Jacques Diaz, Fabrice Lavial, Emiliano P. Ricci, François Ducray, Mathieu Gabut
bioRxiv 2021.05.27.443845; doi: https://doi.org/10.1101/2021.05.27.443845
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RSL24D1 sustains steady-state ribosome biogenesis and pluripotency translational programs in embryonic stem cells
Sébastien Durand, Marion Bruelle, Fleur Bourdelais, Bigitha Bennychen, Juliana Blin-Gonthier, Caroline Isaac, Aurélia Huyghe, Antoine Seyve, Christophe Vanbelle, David Meyronet, Frédéric Catez, Jean-Jacques Diaz, Fabrice Lavial, Emiliano P. Ricci, François Ducray, Mathieu Gabut
bioRxiv 2021.05.27.443845; doi: https://doi.org/10.1101/2021.05.27.443845

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