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A distributed residue network permits conformational binding specificity in a conserved family of actin remodelers

Theresa Hwang, Sara S Parker, Samantha M. Hill, Meucci W. Ilunga, Robert A. Grant, Ghassan Mouneimne, View ORCID ProfileAmy E. Keating
doi: https://doi.org/10.1101/2021.05.27.445944
Theresa Hwang
1Department of Biology, Massachusetts Institute of Technology, Cambridge, MA
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Sara S Parker
2Department of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, AZ
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Samantha M. Hill
2Department of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, AZ
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Meucci W. Ilunga
1Department of Biology, Massachusetts Institute of Technology, Cambridge, MA
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Robert A. Grant
1Department of Biology, Massachusetts Institute of Technology, Cambridge, MA
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Ghassan Mouneimne
2Department of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, AZ
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Amy E. Keating
1Department of Biology, Massachusetts Institute of Technology, Cambridge, MA
3Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA
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  • ORCID record for Amy E. Keating
  • For correspondence: keating@mit.edu
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Abstract

Metazoan proteomes contain many paralogous proteins that have evolved distinct functions. The Ena/VASP family of actin regulators consists of three members that share an EVH1 interaction domain with a 100% conserved binding site. A proteome-wide screen revealed ciliary protein PCARE as a high-affinity ligand for ENAH EVH1. Here we report the surprising observation that PCARE is ~100-fold specific for ENAH over paralogs VASP and EVL and can selectively bind and inhibit ENAH-dependent adhesion in cells. Specificity arises from a mechanism whereby PCARE stabilizes a conformation of the ENAH EVH1 domain that is inaccessible to family members VASP and EVL. Structure-based modeling rapidly identified seven residues distributed throughout EVL that are sufficient to differentiate binding by ENAH vs. EVL. By exploiting the ENAH-specific conformation, we rationally designed the tightest and most selective ENAH binder to date. Our work uncovers a conformational mechanism of interaction specificity that distinguishes highly similar paralogs and establishes tools for dissecting specific Ena/VASP functions in processes including cancer cell invasion.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted June 18, 2021.
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A distributed residue network permits conformational binding specificity in a conserved family of actin remodelers
Theresa Hwang, Sara S Parker, Samantha M. Hill, Meucci W. Ilunga, Robert A. Grant, Ghassan Mouneimne, Amy E. Keating
bioRxiv 2021.05.27.445944; doi: https://doi.org/10.1101/2021.05.27.445944
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A distributed residue network permits conformational binding specificity in a conserved family of actin remodelers
Theresa Hwang, Sara S Parker, Samantha M. Hill, Meucci W. Ilunga, Robert A. Grant, Ghassan Mouneimne, Amy E. Keating
bioRxiv 2021.05.27.445944; doi: https://doi.org/10.1101/2021.05.27.445944

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