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Spatial-ATAC-seq: spatially resolved chromatin accessibility profiling of tissues at genome scale and cellular level
View ORCID ProfileYanxiang Deng, Marek Bartosovic, Sai Ma, Di Zhang, Yang Liu, Xiaoyu Qin, Graham Su, Mina L. Xu, View ORCID ProfileStephanie Halene, Joseph E. Craft, View ORCID ProfileGonçalo Castelo-Branco, View ORCID ProfileRong Fan
doi: https://doi.org/10.1101/2021.06.06.447244
Yanxiang Deng
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
Marek Bartosovic
3Laboratory of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden
Sai Ma
4Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA
Di Zhang
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
Yang Liu
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
Xiaoyu Qin
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
Graham Su
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
Mina L. Xu
5Department of Pathology, Yale University School of Medicine, New Haven, CT, USA
Stephanie Halene
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
6Section of Hematology, Department of Internal Medicine, and Yale Center for RNA Science and Medicine, Yale University School of Medicine, New Haven, CT, USA
Joseph E. Craft
7Department of Immunobiology, Yale University School of Medicine, New Haven, CT 06520, USA.
Gonçalo Castelo-Branco
3Laboratory of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden
8Ming Wai Lau Centre for Reparative Medicine, Stockholm node, Karolinska Institutet, Stockholm, Sweden
Rong Fan
1Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA
2Yale Stem Cell Center and Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520, USA
9Human and Translational Immunology Program, Yale School of Medicine, New Haven, CT 06520, USA
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Posted June 07, 2021.
Spatial-ATAC-seq: spatially resolved chromatin accessibility profiling of tissues at genome scale and cellular level
Yanxiang Deng, Marek Bartosovic, Sai Ma, Di Zhang, Yang Liu, Xiaoyu Qin, Graham Su, Mina L. Xu, Stephanie Halene, Joseph E. Craft, Gonçalo Castelo-Branco, Rong Fan
bioRxiv 2021.06.06.447244; doi: https://doi.org/10.1101/2021.06.06.447244
Spatial-ATAC-seq: spatially resolved chromatin accessibility profiling of tissues at genome scale and cellular level
Yanxiang Deng, Marek Bartosovic, Sai Ma, Di Zhang, Yang Liu, Xiaoyu Qin, Graham Su, Mina L. Xu, Stephanie Halene, Joseph E. Craft, Gonçalo Castelo-Branco, Rong Fan
bioRxiv 2021.06.06.447244; doi: https://doi.org/10.1101/2021.06.06.447244
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