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Second-Generation Antibodies Neutralize Emerging SARS-CoV-2 Variants of Concern

View ORCID ProfileBranislav Kovacech, Lubica Fialova, View ORCID ProfilePeter Filipcik, Rostislav Skrabana, View ORCID ProfileMonika Zilkova, Natalia Paulenka-Ivanovova, View ORCID ProfileAndrej Kovac, Denisa Palova, Gabriela Paulíkova Rolkova, Katarina Tomkova, Natalia Turic Csokova, Karina Markova, Michaela Skrabanova, Kristina Sinska, Neha Basheer, Petra Majerova, Jozef Hanes, Vojtech Parrak, Michal Prcina, View ORCID ProfileOndrej Cehlar, Martin Cente, Juraj Piestansky, Michal Fresser, Michal Novak, Monika Slavikova, Kristina Borsova, Viktoria Cabanova, Bronislava Brejova, Tomas Vinař, Jozef Nosek, Boris Klempa, Norbert Zilka, Eva Kontsekova
doi: https://doi.org/10.1101/2021.06.09.447527
Branislav Kovacech
1AXON COVIDAX a. s.; Bratislava, 811 02, Slovakia
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  • ORCID record for Branislav Kovacech
  • For correspondence: kovacech@axon-neuroscience.eu zilka@axon-neuroscience.eu
Lubica Fialova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Peter Filipcik
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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  • ORCID record for Peter Filipcik
Rostislav Skrabana
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Monika Zilkova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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  • ORCID record for Monika Zilkova
Natalia Paulenka-Ivanovova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Andrej Kovac
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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  • ORCID record for Andrej Kovac
Denisa Palova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Gabriela Paulíkova Rolkova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Katarina Tomkova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Natalia Turic Csokova
3Institute of Neuroimmunology, Slovak Academy of Sciences; Bratislava, 845 10, Slovakia
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Karina Markova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Michaela Skrabanova
3Institute of Neuroimmunology, Slovak Academy of Sciences; Bratislava, 845 10, Slovakia
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Kristina Sinska
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Neha Basheer
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Petra Majerova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Jozef Hanes
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Vojtech Parrak
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Michal Prcina
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Ondrej Cehlar
3Institute of Neuroimmunology, Slovak Academy of Sciences; Bratislava, 845 10, Slovakia
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  • ORCID record for Ondrej Cehlar
Martin Cente
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
3Institute of Neuroimmunology, Slovak Academy of Sciences; Bratislava, 845 10, Slovakia
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Juraj Piestansky
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Michal Fresser
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Michal Novak
4AXON NEUROSCIENCE SE; Larnaca, 6016, Cyprus
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Monika Slavikova
5Biomedical Research Center, Institute of Virology, Slovak Academy of Sciences; Bratislava, 845 05, Slovakia
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Kristina Borsova
5Biomedical Research Center, Institute of Virology, Slovak Academy of Sciences; Bratislava, 845 05, Slovakia
6Department of Microbiology and Virology, Faculty of Natural Sciences, Comenius University in Bratislava; Bratislava, 842 15, Slovakia
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Viktoria Cabanova
5Biomedical Research Center, Institute of Virology, Slovak Academy of Sciences; Bratislava, 845 05, Slovakia
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Bronislava Brejova
7Department of Computer Science, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava; Bratislava, 842 48, Slovakia
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Tomas Vinař
8Department of Applied Informatics, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava; Bratislava, 842 48, Slovakia
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Jozef Nosek
9Department of Biochemistry, Faculty of Natural Sciences, Comenius University in Bratislava; Bratislava, 842 15, Slovakia
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Boris Klempa
5Biomedical Research Center, Institute of Virology, Slovak Academy of Sciences; Bratislava, 845 05, Slovakia
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Norbert Zilka
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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  • For correspondence: kovacech@axon-neuroscience.eu zilka@axon-neuroscience.eu
Eva Kontsekova
2AXON Neuroscience R&D Services SE; Bratislava, 811 02, Slovakia
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Abstract

Recently emerged SARS-CoV-2 variants show resistance to some antibodies that were authorized for emergency use. We employed hybridoma technology combined with authentic virus assays to develop second-generation antibodies, which were specifically selected for their ability to neutralize new variants of SARS-CoV-2. AX290 and AX677, two monoclonal antibodies with non-overlapping epitopes, exhibit subnanomolar or nanomolar affinities to the receptor binding domain of the viral Spike protein carrying amino acid substitutions N501Y, N439K, E484K, K417N, and a combination N501Y/E484K/K417N found in the circulating virus variants. The antibodies showed excellent neutralization of an authentic SARS-CoV-2 virus representing strains circulating in Europe in spring 2020 and also the variants of concern B.1.1.7 and B.1.351. Finally, the combination of the two antibodies prevented the appearance of escape mutations of the authentic SARS-CoV-2 virus. The neutralizing properties were fully reproduced in chimeric mouse-human versions, which may represent a promising tool for COVID-19 therapy.

Competing Interest Statement

ll authors affiliated with AXON COVIDAX a.s., AXON Neuroscience SE, AXON Neuroscience R#x0026;D Services SE (BKo, LF, PF, RS, MZ, NP-I, AK, DP, GPR, KT, NTC, KM, PM, VP, KS, NB, JH, MP, MC, JP, MF, MN, NZ, EK) receive a salary from the respective companies. MS, OC, KB, VC, BB, TV, and JN have no conflict of interest. MS and BKl have received personal payments for plaque reduction neutralization studies.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted June 09, 2021.
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Second-Generation Antibodies Neutralize Emerging SARS-CoV-2 Variants of Concern
Branislav Kovacech, Lubica Fialova, Peter Filipcik, Rostislav Skrabana, Monika Zilkova, Natalia Paulenka-Ivanovova, Andrej Kovac, Denisa Palova, Gabriela Paulíkova Rolkova, Katarina Tomkova, Natalia Turic Csokova, Karina Markova, Michaela Skrabanova, Kristina Sinska, Neha Basheer, Petra Majerova, Jozef Hanes, Vojtech Parrak, Michal Prcina, Ondrej Cehlar, Martin Cente, Juraj Piestansky, Michal Fresser, Michal Novak, Monika Slavikova, Kristina Borsova, Viktoria Cabanova, Bronislava Brejova, Tomas Vinař, Jozef Nosek, Boris Klempa, Norbert Zilka, Eva Kontsekova
bioRxiv 2021.06.09.447527; doi: https://doi.org/10.1101/2021.06.09.447527
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Second-Generation Antibodies Neutralize Emerging SARS-CoV-2 Variants of Concern
Branislav Kovacech, Lubica Fialova, Peter Filipcik, Rostislav Skrabana, Monika Zilkova, Natalia Paulenka-Ivanovova, Andrej Kovac, Denisa Palova, Gabriela Paulíkova Rolkova, Katarina Tomkova, Natalia Turic Csokova, Karina Markova, Michaela Skrabanova, Kristina Sinska, Neha Basheer, Petra Majerova, Jozef Hanes, Vojtech Parrak, Michal Prcina, Ondrej Cehlar, Martin Cente, Juraj Piestansky, Michal Fresser, Michal Novak, Monika Slavikova, Kristina Borsova, Viktoria Cabanova, Bronislava Brejova, Tomas Vinař, Jozef Nosek, Boris Klempa, Norbert Zilka, Eva Kontsekova
bioRxiv 2021.06.09.447527; doi: https://doi.org/10.1101/2021.06.09.447527

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