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Structure of ABCB1/P-glycoprotein bound to the CFTR potentiator ivacaftor

View ORCID ProfileAlessandro Barbieri, View ORCID ProfileNopnithi Thonghin, View ORCID ProfileTalha Shafi, View ORCID ProfileStephen M. Prince, View ORCID ProfileRichard F. Collins, View ORCID ProfileRobert C. Ford
doi: https://doi.org/10.1101/2021.06.11.448073
Alessandro Barbieri
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
2Bioinformatics Institute (BII), Agency for Science, Technology, and Research (A*STAR), 30 Biopolis Street, #07-01 Matrix, Singapore 138671
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Nopnithi Thonghin
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
3Department of Biology, Faculty of Science, Srinakharinwirot University, 114 Sukhumvit 23, Wattana District, Bangkok 10110, Thailand
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Talha Shafi
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
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Stephen M. Prince
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
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Richard F. Collins
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
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Robert C. Ford
1School of Biological Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK
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  • For correspondence: bob.ford@manchester.ac.uk
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Abstract

ABCB1 (P-glycoprotein) is an ATP binding cassette transporter that is involved in the clearance of xenobiotics and it affects the disposition of many drugs in the body. Here we have studied ABCB1 in the drug-bound and drug-free states, simultaneously, using high contrast cryo-electron microscopy imaging and a Volta phase plate. The binding of the potent CFTR potentiator, ivacaftor, at a site in the central aqueous cavity is mediated by transmembrane α-helices 3,6,10,11 & 12. Binding is associated with a wider separation of the two halves of the transporter in the inward-facing state. Induced-fit changes the nucleotide binding domains in a way that may explain their increased affinity for ATP when drug is bound. Comparison of ivacaftor-bound structures of CFTR and ABCB1 suggests common features in the binding modes.

Competing Interest Statement

The authors have declared no competing interest.

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Posted June 11, 2021.
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Structure of ABCB1/P-glycoprotein bound to the CFTR potentiator ivacaftor
Alessandro Barbieri, Nopnithi Thonghin, Talha Shafi, Stephen M. Prince, Richard F. Collins, Robert C. Ford
bioRxiv 2021.06.11.448073; doi: https://doi.org/10.1101/2021.06.11.448073
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Structure of ABCB1/P-glycoprotein bound to the CFTR potentiator ivacaftor
Alessandro Barbieri, Nopnithi Thonghin, Talha Shafi, Stephen M. Prince, Richard F. Collins, Robert C. Ford
bioRxiv 2021.06.11.448073; doi: https://doi.org/10.1101/2021.06.11.448073

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