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Time-resolved multivariate pattern analysis of infant EEG data

View ORCID ProfileKira Ashton, View ORCID ProfileBenjamin D. Zinszer, Radoslaw M. Cichy, Charles A. Nelson III, View ORCID ProfileRichard N. Aslin, View ORCID ProfileLaurie Bayet
doi: https://doi.org/10.1101/2021.06.16.448720
Kira Ashton
1Department of Psychology, American University, Washington, DC 20016, USA
2Center for Behavioral Neuroscience, American University, Washington, DC 20016, USA
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  • For correspondence: ka7150a@american.edu
Benjamin D. Zinszer
3Department of Psychology, Swarthmore College, Swarthmore, PA 19081, USA
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Radoslaw M. Cichy
4Department of Education and Psychology, Freie Universität Berlin, 14195 Berlin, Germany
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Charles A. Nelson III
5Boston Children’s Hospital, Boston, MA 02115, USA
6Department of Pediatrics, Harvard Medical School, Boston, MA 02115, USA
7Graduate School of Education, Harvard, Cambridge, MA 02138, USA
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Richard N. Aslin
8Haskins Laboratories, 300 George Street, New Haven, CT 06511, USA
9Psychological Sciences Department, University of Connecticut, Storrs, CT 06269, USA
10Department of Psychology, Yale University, New Haven, CT 06511, USA
11Yale Child Study Center, School of Medicine, New Haven, CT 06519, USA
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Laurie Bayet
1Department of Psychology, American University, Washington, DC 20016, USA
2Center for Behavioral Neuroscience, American University, Washington, DC 20016, USA
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Abstract

Time-resolved multivariate pattern analysis (MVPA), a popular technique for analyzing magneto- and electro-encephalography (M/EEG) neuroimaging data, quantifies the extent and time-course by which neural representations support the discrimination of relevant stimuli dimensions. As EEG is widely used for infant neuroimaging, time-resolved MVPA of infant EEG data is a particularly promising tool for infant cognitive neuroscience. MVPA methods have recently been applied to common infant imaging methods such as EEG and fNIRS. In this tutorial, we provide and describe code to implement time-resolved, within-subject MVPA with infant EEG data. A pipeline for time-resolved MVPA based on linear SVM classification is described and implemented with accompanying code in both Matlab and Python. Results from a test dataset indicated that in both infants and adults this method reliably produced above chance classification accuracy. Extensions of the core pipeline are presented including both geometric- and accuracy-based representational similarity analysis, implemented in Python. Common choices of implementation are presented and discussed. As the amount of artifact-free EEG data contributed by each participant is lower in studies of infants than in studies of children and adults, we also explore and discuss the impact of varying participant-level inclusion thresholds on resulting MVPA findings in these datasets.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted June 17, 2021.
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Time-resolved multivariate pattern analysis of infant EEG data
Kira Ashton, Benjamin D. Zinszer, Radoslaw M. Cichy, Charles A. Nelson III, Richard N. Aslin, Laurie Bayet
bioRxiv 2021.06.16.448720; doi: https://doi.org/10.1101/2021.06.16.448720
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Time-resolved multivariate pattern analysis of infant EEG data
Kira Ashton, Benjamin D. Zinszer, Radoslaw M. Cichy, Charles A. Nelson III, Richard N. Aslin, Laurie Bayet
bioRxiv 2021.06.16.448720; doi: https://doi.org/10.1101/2021.06.16.448720

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