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Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data
Dongshunyi Li, Jeremy J. Velazquez, Jun Ding, Joshua Hislop, Mo R. Ebrahimkhani, Ziv Bar-Joseph
doi: https://doi.org/10.1101/2021.07.28.454054
Dongshunyi Li
1Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA
Jeremy J. Velazquez
2Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA
3Pittsburgh Liver Research Center, University of Pittsburgh, Pittsburgh, PA 15261, USA
Jun Ding
4Meakins-Christie Laboratories, Department of Medicine, McGill University Health Centre, Montreal, Quebec, H4A 3J1, Canada
Joshua Hislop
2Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA
3Pittsburgh Liver Research Center, University of Pittsburgh, Pittsburgh, PA 15261, USA
5Department of Bioengineering, Swanson School of Engineering, University of Pittsburgh, Pittsburgh, PA 15261, USA
Mo R. Ebrahimkhani
2Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA
3Pittsburgh Liver Research Center, University of Pittsburgh, Pittsburgh, PA 15261, USA
5Department of Bioengineering, Swanson School of Engineering, University of Pittsburgh, Pittsburgh, PA 15261, USA
6McGowan Institute for Regenerative Medicine, University of Pittsburgh, Pittsburgh, PA 15219, USA
Ziv Bar-Joseph
1Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA
7Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA
Posted July 29, 2021.
Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data
Dongshunyi Li, Jeremy J. Velazquez, Jun Ding, Joshua Hislop, Mo R. Ebrahimkhani, Ziv Bar-Joseph
bioRxiv 2021.07.28.454054; doi: https://doi.org/10.1101/2021.07.28.454054
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