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Localized hypermutation drives the evolution of unstable colistin resistance in Pseudomonas aeruginosa

View ORCID ProfileNatalia Kapel, View ORCID ProfileJulio Diaz Caballero, View ORCID ProfileR. Craig MacLean
doi: https://doi.org/10.1101/2021.08.10.455869
Natalia Kapel
1University of Oxford, Department of Zoology, 11a Mansfield Road, Oxford OX1 3SZ, UK
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Julio Diaz Caballero
1University of Oxford, Department of Zoology, 11a Mansfield Road, Oxford OX1 3SZ, UK
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R. Craig MacLean
1University of Oxford, Department of Zoology, 11a Mansfield Road, Oxford OX1 3SZ, UK
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  • For correspondence: craig.maclean@zoo.ox.ac.uk
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Abstract

Colistin has emerged as an important last line of defence for the treatment of infections caused by antibiotic resistant Gram-negative pathogens. Here we investigate the responses of ≈1,000 populations of an MDR strain of P. aeruginosa to a high dose of colistin. Colistin exposure resulted in rapid cell death, but a sub-set of populations eventually recovered due to the outgrowth of heteroresistant cells. Genome sequencing revealed that heteroresistance was primarily driven by mutations in the PmrAB two-component system that occurred at a rate (≈2×10-5 per cell division) that was 103-104 fold higher than typical resistance mutation rates. Crucially, this elevated mutation rate was only found in pmrB, demonstrating that hypermutability is localized to this gene. PmrAB provides resistance to antimicrobial peptides that are involved in host immunity, suggesting that this pathogen may have evolved a high mutation rate as an adaption to generate mutants that are resistant to host antimicrobial peptides that are secreted during infection. Interestingly, we found no mutations in 1/3 of populations that recovered from colistin treatment, suggesting that phenotypic plasticity and/or persister cells contribute to the ability of Pseudomonas to adapt to colistin.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 10, 2021.
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Localized hypermutation drives the evolution of unstable colistin resistance in Pseudomonas aeruginosa
Natalia Kapel, Julio Diaz Caballero, R. Craig MacLean
bioRxiv 2021.08.10.455869; doi: https://doi.org/10.1101/2021.08.10.455869
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Localized hypermutation drives the evolution of unstable colistin resistance in Pseudomonas aeruginosa
Natalia Kapel, Julio Diaz Caballero, R. Craig MacLean
bioRxiv 2021.08.10.455869; doi: https://doi.org/10.1101/2021.08.10.455869

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