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Enabling metagenomic surveillance for bacterial tick-borne pathogens using nanopore sequencing with adaptive sampling

Evan J. Kipp, Laramie L. Lindsey, Benedict S. Khoo, View ORCID ProfileChristopher Faulk, Jonathan D. Oliver, Peter A. Larsen
doi: https://doi.org/10.1101/2021.08.17.456696
Evan J. Kipp
1Department of Veterinary and Biomedical Sciences - College of Veterinary Medicine, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; (E.J.K.); (L.L.L.); (P.A.L.)
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  • For correspondence: kipp0046@umn.edu linds758@umn.edu plarsen@umn.edu
Laramie L. Lindsey
1Department of Veterinary and Biomedical Sciences - College of Veterinary Medicine, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; (E.J.K.); (L.L.L.); (P.A.L.)
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  • For correspondence: kipp0046@umn.edu linds758@umn.edu plarsen@umn.edu
Benedict S. Khoo
2Division of Environmental Health Sciences - School of Public Health, University of Minnesota—Twin Cities, Minneapolis, Minnesota, United States; (B.K.); (J.D.O.)
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  • For correspondence: khoo0011@umn.edu joliver@umn.edu
Christopher Faulk
3Department of Animal Science - College of Food, Agricultural and Natural Resource Sciences, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; (C.F.)
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  • ORCID record for Christopher Faulk
  • For correspondence: cfaulk@umn.edu
Jonathan D. Oliver
2Division of Environmental Health Sciences - School of Public Health, University of Minnesota—Twin Cities, Minneapolis, Minnesota, United States; (B.K.); (J.D.O.)
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  • For correspondence: khoo0011@umn.edu joliver@umn.edu
Peter A. Larsen
1Department of Veterinary and Biomedical Sciences - College of Veterinary Medicine, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; (E.J.K.); (L.L.L.); (P.A.L.)
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  • For correspondence: plarsen@umn.edu kipp0046@umn.edu linds758@umn.edu plarsen@umn.edu
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Article Information

doi 
https://doi.org/10.1101/2021.08.17.456696
History 
  • August 17, 2021.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.

Author Information

  1. Evan J. Kipp1,
  2. Laramie L. Lindsey1,
  3. Benedict S. Khoo2,
  4. Christopher Faulk3,
  5. Jonathan D. Oliver2,† and
  6. Peter A. Larsen1,†,*
  1. 1Department of Veterinary and Biomedical Sciences - College of Veterinary Medicine, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; kipp0046{at}umn.edu (E.J.K.); linds758{at}umn.edu (L.L.L.); plarsen{at}umn.edu (P.A.L.)
  2. 2Division of Environmental Health Sciences - School of Public Health, University of Minnesota—Twin Cities, Minneapolis, Minnesota, United States; khoo0011{at}umn.edu (B.K.); joliver{at}umn.edu (J.D.O.)
  3. 3Department of Animal Science - College of Food, Agricultural and Natural Resource Sciences, University of Minnesota—Twin Cities, St. Paul, Minnesota, United States; cfaulk{at}umn.edu (C.F.)
  1. ↵*Correspondence: plarsen{at}umn.edu
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Enabling metagenomic surveillance for bacterial tick-borne pathogens using nanopore sequencing with adaptive sampling
Evan J. Kipp, Laramie L. Lindsey, Benedict S. Khoo, Christopher Faulk, Jonathan D. Oliver, Peter A. Larsen
bioRxiv 2021.08.17.456696; doi: https://doi.org/10.1101/2021.08.17.456696
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Enabling metagenomic surveillance for bacterial tick-borne pathogens using nanopore sequencing with adaptive sampling
Evan J. Kipp, Laramie L. Lindsey, Benedict S. Khoo, Christopher Faulk, Jonathan D. Oliver, Peter A. Larsen
bioRxiv 2021.08.17.456696; doi: https://doi.org/10.1101/2021.08.17.456696

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