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A novel multifunctional role for Hsp70 in binding post-translational modifications on client proteins

View ORCID ProfileNitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, View ORCID ProfileVerónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, View ORCID ProfileAndrew W. Truman
doi: https://doi.org/10.1101/2021.08.25.457671
Nitika
1Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC 28223 USA
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  • For correspondence: nnitika@uncc.edu atruman1@uncc.edu
Bo Zheng
1Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC 28223 USA
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Linhao Ruan
2Center for Cell Dynamics and Department of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, MD 21205 USA.
3Biochemistry, Cellular and Molecular Biology (BCMB) Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD 21287 USA.
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Jake T. Kline
6Department of Biology, University of Oklahoma, Norman, OK 73019 USA
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Jacek Sikora
7AbbVie Inc., La Grange, IL 60525 USA
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Mara Texeira Torres
8School of Biological and Chemical Sciences, Queen Mary University, London E1 4NS UK
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Yuhao Wang
2Center for Cell Dynamics and Department of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, MD 21205 USA.
3Biochemistry, Cellular and Molecular Biology (BCMB) Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD 21287 USA.
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Jade E. Takakuwa
1Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC 28223 USA
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Romain Huguet
9Thermo Scientific, San Jose, CA 95134 USA
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Cinzia Klemm
8School of Biological and Chemical Sciences, Queen Mary University, London E1 4NS UK
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Verónica A. Segarra
10Department of Biology, High Point University, High Point, NC 27268 USA
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  • ORCID record for Verónica A. Segarra
Matthew J. Winters
11Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605 USA
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Peter M. Pryciak
11Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605 USA
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Peter H. Thorpe
9Thermo Scientific, San Jose, CA 95134 USA
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Kazuo Tatebayashi
12Laboratory of Molecular Genetics, Frontier Research Unit, Institute of Medical Science, The University of Tokyo 108-8639, Tokyo, Japan
13Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
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Rong Li
2Center for Cell Dynamics and Department of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, MD 21205 USA.
3Biochemistry, Cellular and Molecular Biology (BCMB) Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD 21287 USA.
4Mechanobiology Institute and Department of Biological Sciences, National University of Singapore, Singapore 117411
5Department of Chemical and Biomolecular Engineering, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21218 USA
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Luca Fornelli
6Department of Biology, University of Oklahoma, Norman, OK 73019 USA
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Andrew W. Truman
1Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC 28223 USA
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  • For correspondence: nnitika@uncc.edu atruman1@uncc.edu
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Summary

Hsp70 interactions are critical for cellular viability and the response to stress. Previous attempts to characterize Hsp70 interactions have been limited by their transient nature and inability of current technologies to distinguish direct vs bridged interactions. We report the novel use of cross-linking mass spectrometry (XL-MS) to comprehensively characterize the budding yeast Hsp70 protein interactome. Using this approach, we have gained fundamental new insights into Hsp70 function, including definitive evidence of Hsp70 self-association as well as multi-point interaction with its client proteins. In addition to identifying a novel set of direct Hsp70 interactors which can be used to probe chaperone function in cells, we have also identified a suite of PTM-associated Hsp70 interactions. The majority of these PTMs have not been previously reported and appear to be critical in the regulation of client protein function. These data indicate that one of the mechanisms by which PTMs contribute to protein function is by facilitating interaction with chaperones. Taken together, we propose that XL-MS analysis of chaperone complexes may be used as a unique way to identify biologically-important PTMs on client proteins.

  • In vivo confirmation of Hsp70 dimerization

  • Comprehensive direct interactome of Hsp70

  • Multi-domain interactions between Hsp70 and client proteins

  • Identification of novel biologically-important client protein PTMs

Competing Interest Statement

The authors have declared no competing interest.

  • Abbreviations

    AP-MS
    Affinity purification mass spectrometry
    BiFC
    Bimolecular fluorescence complementation
    CMV
    human cytomegalovirus promoter
    CTD
    C-terminal Domain
    DSSO
    disuccinimidyl sulfoxide
    GO
    Gene ontology
    HSE
    Heat Shock Response Element
    HSP
    Heat Shock Protein
    MS
    mass spectrometry
    NBD
    Nucleotide-binding domain
    PTM
    Post-translational modifications
    SBD
    Substrate-binding domain
    VN
    Venus amino-terminal end
    VC
    Venus carboxy-terminal end
    XL-MS
    Cross-linking mass spectrometry
    Y2H
    Yeast two-hybrid
  • Copyright 
    The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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    Posted August 25, 2021.
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    A novel multifunctional role for Hsp70 in binding post-translational modifications on client proteins
    Nitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, Verónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, Andrew W. Truman
    bioRxiv 2021.08.25.457671; doi: https://doi.org/10.1101/2021.08.25.457671
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    A novel multifunctional role for Hsp70 in binding post-translational modifications on client proteins
    Nitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, Verónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, Andrew W. Truman
    bioRxiv 2021.08.25.457671; doi: https://doi.org/10.1101/2021.08.25.457671

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