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In Silico analysis of PE_PGRS20 (Rv1068c) protein in Mycobacterium tuberculosis H37Rv

View ORCID ProfileSaleem Ahmad, AnupKumar Kesavan
doi: https://doi.org/10.1101/2021.08.31.458215
Saleem Ahmad
1Guru Nanak Dev University, Amritsar, Punjab, India
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  • For correspondence: saleemahmad449@gmail.com
AnupKumar Kesavan
1Guru Nanak Dev University, Amritsar, Punjab, India
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Abstract

The genetic makeup of Mycobacterium tuberculosis reveals the presence of an unknown repeat sequence of PE_PGRS family proteins that are responsible for antigenic variations and many unknown functions that includes necrosis of macrophage and apoptosis. The structure and function of these glycine-rich proteins can be predictable by homology modeling, the Ab-initio method, or by using different tools of bioinformatics. In this study, we selected, PE_PGRS20 (Rv1068c) an unknown PE_PGRS protein. We suggest that the PE_PGRS20 gene is linked with the others genes of the espACD operon which are the virulence factors in the M. tuberculosis H37Rv strain. The genes associated with this protein secretion system can perform the synthesis of a special type of fatty acid known as phthioceroldimycocerates (PDIM).

Docking with different anti TB drugs shows binding with PE_PGRS20 protein which suggests that the target protein may involve in the drug resistance.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted September 01, 2021.
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In Silico analysis of PE_PGRS20 (Rv1068c) protein in Mycobacterium tuberculosis H37Rv
Saleem Ahmad, AnupKumar Kesavan
bioRxiv 2021.08.31.458215; doi: https://doi.org/10.1101/2021.08.31.458215
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In Silico analysis of PE_PGRS20 (Rv1068c) protein in Mycobacterium tuberculosis H37Rv
Saleem Ahmad, AnupKumar Kesavan
bioRxiv 2021.08.31.458215; doi: https://doi.org/10.1101/2021.08.31.458215

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